| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_A0189 |
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| Symbol | epaR |
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| ID | 6273464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010660 |
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| Strand | + |
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| Start bp | 128927 |
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| End bp | 129664 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641728827 |
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| Product | type III secretion apparatus protein SpaR/YscT/HrcT |
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| Protein accession | YP_001883218 |
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| Protein GI | 187734285 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4791] Type III secretory pathway, component EscT |
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| TIGRFAM ID | [TIGR01401] type III secretion protein SpaR/YscT/HrcT |
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Plasmid Coverage information |
| Num covering plasmid clones | 144 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTTTTAA TACTCCTGAA CGGCGTTTTT TTTAGATTGG CTCCATTATT TTTCTTTCTT
CCATTTTTAA ATAACGGTAT AATTTCTCCA TCTATTAGAA TACCTGTGAT TTTTCTTGTT
GCATCAGGAT TAATTACTTC TGGTAAGGTA GACATAGGTT CTTCTGTTTT TGAACATGTT
TATTTCCTTA TGTTCAAGGA AATAATTGTT GGCCTCCTTC TCTCTTTTTG CTTGTCTCTT
CCCTTTTGGA TATTTCATGC TGTTGGTAGC ATTATTGACA ACCAGCGTGG GGCAACGCTT
AGTAGTTCAA TTGATCCTGC CAATGGTGTT GATACGTCTG AGTTGGCAAA ATTTTTCAAT
CTTTTTTCTG CAGTTGTATT TCTATACAGT GGTGGAATGG TCTTTATTTT AGAATCCATA
CAATTGTCTT ATAATATATG CCCGTTATTT TCTCAATGTT CTTTCCGTGT CTCAAATATC
TTAACATTTC TGACTTTATT GGCAAGTCAG GCTGTTATTT TAGCCAGTCC TGTTATGATA
GTATTGTTAC TATCAGAAGT ATTACTTGGT GTATTATCGA GATTTGCTCC GCAGATGAAT
GCTTTTTCCG TATCATTAAC TATTAAAAGT TTACTTGCAA TATTTATTAT TTTCATCTGT
TCTTCTACTA TTTACTTTTC TAAAGTTCAA TTTTTCCTCG GTGAACATAA ATTTTTCACA
AATCTATTTG TTAGATAA
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| Protein sequence | MFLILLNGVF FRLAPLFFFL PFLNNGIISP SIRIPVIFLV ASGLITSGKV DIGSSVFEHV
YFLMFKEIIV GLLLSFCLSL PFWIFHAVGS IIDNQRGATL SSSIDPANGV DTSELAKFFN
LFSAVVFLYS GGMVFILESI QLSYNICPLF SQCSFRVSNI LTFLTLLASQ AVILASPVMI
VLLLSEVLLG VLSRFAPQMN AFSVSLTIKS LLAIFIIFIC SSTIYFSKVQ FFLGEHKFFT
NLFVR
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