Gene SaurJH1_1275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH1_1275 
Symbol 
ID5315446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH1 
KingdomBacteria 
Replicon accessionNC_009632 
Strand
Start bp1294094 
End bp1294900 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content31% 
IMG OID640779363 
ProductRNA-binding S4 domain-containing protein 
Protein accessionYP_001316416 
Protein GI150393741 
COG category[S] Function unknown 
COG ID[COG2302] Uncharacterized conserved protein, contains S4-like domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000253973 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATTTT ATAATTTTTT TAAGGTAGTG ATTAACATAG ATATTTATCA ACACTTTAGA 
CAGGAAGAAT ACGAATTAAT TGATCAGCTA ACGGATAAAT GTGATCAAGC GGAACAACAT
TATGCACCAG TATTAACGCA TTTTTTAGAT CCAAGAGGGC AATATATATT GGAAGTGATT
TGTGGCAGTT ATGAAGATTT AAACGTCTCT TTTTATGGCG GGCCTAATGC TGAAAGAAAA
AGAGCAATCA TTTCGCCGAA CTATTATGAA CCTAAAGAAA GTGACTTTGA ATTAACTTTA
ATGGAAATAG AGTATCCTGA AAAATTCGTC ACTTTAAAAC ATCAACATAT TTTAGGGACA
TTAATGTCTT TAGGTATCGA ACGCGAACAA GTTGGAGATA TAATTGTGAA TGAACGAATT
CAATTTGTTT TGACAAGTAG ATTGGAATCA TTTATTATGT TAGAATTACA ACGTATTAAA
GGCGCATCAG TTAAACTTTA TACTATTCCA GTAACAGATA TGATACAATC TAATGAGAAT
TGGAAAAATG AAAGTGCAAC AGTTAGTTCT TTAAGGTTAG ATGTTGTTAT TAAAGAAATG
ATACGTAAAT CACGTACGAT TGCGAAACAA CTAATTGAAA AAAAACGTGT TAAAGTGAAT
CACACTATTG TTGATTCAGC AGATTTTCAA TTACAAGCAA ATGATTTAAT ATCCATCCAA
GGTTTTGGTA GAGCACACAT TACTGACTTA GGTGGTAAAA CTAAAAAAGA TAAAACGCAC
ATTACCTATA GAACATTATT CAAATAG
 
Protein sequence
MVFYNFFKVV INIDIYQHFR QEEYELIDQL TDKCDQAEQH YAPVLTHFLD PRGQYILEVI 
CGSYEDLNVS FYGGPNAERK RAIISPNYYE PKESDFELTL MEIEYPEKFV TLKHQHILGT
LMSLGIEREQ VGDIIVNERI QFVLTSRLES FIMLELQRIK GASVKLYTIP VTDMIQSNEN
WKNESATVSS LRLDVVIKEM IRKSRTIAKQ LIEKKRVKVN HTIVDSADFQ LQANDLISIQ
GFGRAHITDL GGKTKKDKTH ITYRTLFK