Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_1275 |
Symbol | |
ID | 5315446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | + |
Start bp | 1294094 |
End bp | 1294900 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640779363 |
Product | RNA-binding S4 domain-containing protein |
Protein accession | YP_001316416 |
Protein GI | 150393741 |
COG category | [S] Function unknown |
COG ID | [COG2302] Uncharacterized conserved protein, contains S4-like domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000253973 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTATTTT ATAATTTTTT TAAGGTAGTG ATTAACATAG ATATTTATCA ACACTTTAGA CAGGAAGAAT ACGAATTAAT TGATCAGCTA ACGGATAAAT GTGATCAAGC GGAACAACAT TATGCACCAG TATTAACGCA TTTTTTAGAT CCAAGAGGGC AATATATATT GGAAGTGATT TGTGGCAGTT ATGAAGATTT AAACGTCTCT TTTTATGGCG GGCCTAATGC TGAAAGAAAA AGAGCAATCA TTTCGCCGAA CTATTATGAA CCTAAAGAAA GTGACTTTGA ATTAACTTTA ATGGAAATAG AGTATCCTGA AAAATTCGTC ACTTTAAAAC ATCAACATAT TTTAGGGACA TTAATGTCTT TAGGTATCGA ACGCGAACAA GTTGGAGATA TAATTGTGAA TGAACGAATT CAATTTGTTT TGACAAGTAG ATTGGAATCA TTTATTATGT TAGAATTACA ACGTATTAAA GGCGCATCAG TTAAACTTTA TACTATTCCA GTAACAGATA TGATACAATC TAATGAGAAT TGGAAAAATG AAAGTGCAAC AGTTAGTTCT TTAAGGTTAG ATGTTGTTAT TAAAGAAATG ATACGTAAAT CACGTACGAT TGCGAAACAA CTAATTGAAA AAAAACGTGT TAAAGTGAAT CACACTATTG TTGATTCAGC AGATTTTCAA TTACAAGCAA ATGATTTAAT ATCCATCCAA GGTTTTGGTA GAGCACACAT TACTGACTTA GGTGGTAAAA CTAAAAAAGA TAAAACGCAC ATTACCTATA GAACATTATT CAAATAG
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Protein sequence | MVFYNFFKVV INIDIYQHFR QEEYELIDQL TDKCDQAEQH YAPVLTHFLD PRGQYILEVI CGSYEDLNVS FYGGPNAERK RAIISPNYYE PKESDFELTL MEIEYPEKFV TLKHQHILGT LMSLGIEREQ VGDIIVNERI QFVLTSRLES FIMLELQRIK GASVKLYTIP VTDMIQSNEN WKNESATVSS LRLDVVIKEM IRKSRTIAKQ LIEKKRVKVN HTIVDSADFQ LQANDLISIQ GFGRAHITDL GGKTKKDKTH ITYRTLFK
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