| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_1198 |
|---|
| Symbol | |
|---|
| ID | 5316204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | + |
|---|
| Start bp | 1220637 |
|---|
| End bp | 1221548 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640779285 |
|---|
| Product | protoheme IX farnesyltransferase |
|---|
| Protein accession | YP_001316339 |
|---|
| Protein GI | 150393664 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
|---|
| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAG AGCATACTTT GTCACAAAAT ATTAGCAGAG TTAACTTCAA AGAATTGCAA
CAGATAATTA AAATGGGACT TGTTCAAGGT AACTTAATTC CGGCTTTTGC GGGCGCATGG
CTAGCAGTTG TAATGACAAA TCATTCCTTC TTATCATCAA TACCTCAAAT TTTATTAATG
CTATTTGGAT CTACTTTAAT TATGGGTGGC GCATGTGCGT TAAATAATTA TTACGACCAA
GATATTGATC GTATTATGCC TAGTAAACAA AATAGACCAA CTGTAAATAA TAGAATTACA
GATCAAAATT TATTACTATT AAGTTTTGGT ATGATGTTAG TTGGAGAAAT TTGTTTGTTT
TTATTGAATA TACCATCAGG CGTACTTGGT CTTATGGGGA TTGTAGGTTA TGTGTCTTAT
TACTCAATAT GGTCTAAAAG ACATACAACA TGGAACACAG TGATTGGGAG TTTTCCTGGA
GCAGTACCAC CACTAATTGG ATGGGTTGCA ATTGAAGGAC AAATTAGTTT AACAGCGATT
GCGCTGTTTT TAGTTGTATT TTGTTGGCAA CCAATTCATT TTTATGCCTT AGCTATTAAA
CGTAAAGATG AATATGCACT TGCAAATATT CCAATGTTAC CATCAGTTAA AGGCTTTAAA
CGTACACGTG TCAGTATGTT TATCTGGTTG ATTATTTTAT TGCCAGTACC TTTATTACTA
ATAAATTTAG GTGTCGTATT CGTAGTGTTA GCTACATTAT TAAATTTAGG ATGGATTGCA
TTAGGTTTAA CAACATTTAA GAAAAATTCA GATCAAACAA AATGGGCAAC ACAAATGTTT
ATATATTCAC TAAATTATTT AGTGATCTTT TTCGTGTTAG CTGTAATTGT TTCATTACTT
ACTTTGATCT AG
|
|---|
| Protein sequence | MSKEHTLSQN ISRVNFKELQ QIIKMGLVQG NLIPAFAGAW LAVVMTNHSF LSSIPQILLM
LFGSTLIMGG ACALNNYYDQ DIDRIMPSKQ NRPTVNNRIT DQNLLLLSFG MMLVGEICLF
LLNIPSGVLG LMGIVGYVSY YSIWSKRHTT WNTVIGSFPG AVPPLIGWVA IEGQISLTAI
ALFLVVFCWQ PIHFYALAIK RKDEYALANI PMLPSVKGFK RTRVSMFIWL IILLPVPLLL
INLGVVFVVL ATLLNLGWIA LGLTTFKKNS DQTKWATQMF IYSLNYLVIF FVLAVIVSLL
TLI
|
|---|
| |