Gene SaurJH1_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH1_1004 
Symbol 
ID5315341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH1 
KingdomBacteria 
Replicon accessionNC_009632 
Strand
Start bp1037029 
End bp1037955 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content33% 
IMG OID640779091 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001316147 
Protein GI150393472 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.243628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGAAAT ATATTTTCAA ACGATTTATT TATATGCTTA TTTCTTTATT TATTATTATT 
ACAATTACAT TTTTCTTAAT GAAATTAATG CCAGGTTCGC CATTTAACGA TGCTAAATTA
AATGCTGAAC AAAAAGAAAT TTTAAATGAA AAATATGGAT TAAATGATCC TGTAGCTACG
CAGTATTTAC ATTATTTAAA AAATGTTGTT ACAGGCGATT TTGGTAATTC ATTCCAGTAT
CATAATCAAC CTGTGTGGGA TTTGATTAAA CCGAGACTAC TACCTTCTTT TGAAATGGGT
CTTACAGCAA TGTTCATCGG TGTGATACTG GGACTTATTT TAGGTGTTGC AGCAGCTACT
AAACAAAATT CTTGGGTTGA CTATACAACT ACAGTTATTT CAGTTATTGC TGTATCTGTA
CCATCTTTTG TACTTGCTGT ACTTTTACAA TATGTATTTG CAGTTAAATT AAGATGGTTC
CCAGTAGCTG GATGGGAAGG TTTTTCGACC GCGGTATTAC CGTCACTTGC ATTATCTGCA
GCTGTTTTAG CAACTGTCGC CAGATACATA AGAGCAGAGA TGATAGAGGT ATTAAGTTCA
GACTATATTT TATTAGCGAG AGCTAAAGGT AATTCGACAA TGCGTGTACT TTTTGGACAT
GCACTTAGAA ATGCTTTAAT TCCAATTATT ACAATTATCG TTCCCATGTT AGCAAGTATT
TTAACAGGCA CTTTAACAAT TGAAAATATT TTTGGGGTTC CTGGATTAGG GGATCAATTC
GTACGTTCAA TTACAACAAA TGATTTCTCA GTAATCATGG CAATCACACT ATTATTTAGC
ACACTGTTTA TCGTTTCTAT TTTTATTGTA GATATTTTGT ACGGTGTGAT AGATCCACGA
ATTCGTGTTC AAGGAGGTAA AAAATAA
 
Protein sequence
MGKYIFKRFI YMLISLFIII TITFFLMKLM PGSPFNDAKL NAEQKEILNE KYGLNDPVAT 
QYLHYLKNVV TGDFGNSFQY HNQPVWDLIK PRLLPSFEMG LTAMFIGVIL GLILGVAAAT
KQNSWVDYTT TVISVIAVSV PSFVLAVLLQ YVFAVKLRWF PVAGWEGFST AVLPSLALSA
AVLATVARYI RAEMIEVLSS DYILLARAKG NSTMRVLFGH ALRNALIPII TIIVPMLASI
LTGTLTIENI FGVPGLGDQF VRSITTNDFS VIMAITLLFS TLFIVSIFIV DILYGVIDPR
IRVQGGKK