Gene Saro_3972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3972 
Symbol 
ID5077502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand
Start bp140526 
End bp140915 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content67% 
IMG OID640481078 
ProductPilT domain-containing protein 
Protein accessionYP_001165740 
Protein GI146275579 
COG category[S] Function unknown 
COG ID[COG4374] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAG TGGTGCTCGA TGCCTCAGCG CTCCTTGCCT TGCTCCGGGA CGAGCCCGGA 
GCCGACAAGG TTGCCGACGC CATCGCGGAT GCTCGCATGT CCAGCGTCAA CTTTGCCGAA
GTCGTCAGCC ACTTCATTCA CGCCGGCATG CCAGCGGGCG AAGTCGATGC GATGCTGAAA
CCCTTGCCGA TGGCCATCGT CGATGCGGAC CACGGCCTTG CCACGATCGC CGGACGCTTG
CGCGCCGCGA CGGCCGAAGC CGGCCTGTCG CTCGGCGACC GGTTCTGCCT TGCACTGGCC
CGCCGCGATG GCCTCCCAGC CCTGACTGCG GACAAGCAGT GGCGGACCGT TGCCGCCGCC
GCCGGGGTTA GCGTCGCAGT CATTCGCTGA
 
Protein sequence
MSEVVLDASA LLALLRDEPG ADKVADAIAD ARMSSVNFAE VVSHFIHAGM PAGEVDAMLK 
PLPMAIVDAD HGLATIAGRL RAATAEAGLS LGDRFCLALA RRDGLPALTA DKQWRTVAAA
AGVSVAVIR