| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3925 |
|---|
| Symbol | |
|---|
| ID | 5077409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009426 |
|---|
| Strand | + |
|---|
| Start bp | 95510 |
|---|
| End bp | 97582 |
|---|
| Gene Length | 2073 bp |
|---|
| Protein Length | 690 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640481032 |
|---|
| Product | parB-like partition protein |
|---|
| Protein accession | YP_001165694 |
|---|
| Protein GI | 146275533 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACA TCGAGATGAT CCCGCTTGGC AAGCTACGCT TGTCCGAGGC CAACGTCCGC
AAGAATGACA GCAACCTCTT CATCGAGGAA CTCGCCGCCA ACATCGAGGC CAAGGGCCTC
CTTCAGAACT TGATCGTGGC GCCAGCCAAG AAGCGGGGCA TGTTTGATGT GACCGCCGGT
GGTCGCCGCC TGCGAGCACT GAACTTTCTC CTCGAGGCGG GCAAGCTCGC CAAGGATCAC
CCCGTCGCCT GCCGCGTGCT CGACATCGAT GCCGCCGAGC AGTCCGAACT CTCGCTGATC
GAGAACGTCA TCCGGCTCGA CATGACCCCG ACCGATGAAA TCCGGGCCTA CAAGCACTTC
GTCAATGAGG GCAGCGACCT CGACGCGATT GCCAAGCGGT TTGGCCGCAC CCGCCGGTTC
ATCGAAGGCC GCCTGCGCCT CGCCGACCTC GCTGATCCGA TCTTCGCCGC ACTCGAGGAA
GGCAAGATCA CCCTGGATGT CGCCAAGGCC TACGCAACGA CCCCCAACCA CGAACGCCAG
ATGCTGGTGT GGAACGAGCT CTCGAACTCC TGGCAGGGCA ACCAGGCAGA TTCCATCCGC
CGGATGATCA CCCACAGCGC GATCCGCTCG TCCTCGCCGA TGGCGAAGCT CGCAAGCGAA
GCAGATTACC TCGCCGCCGG CGGCAAGATC GAGCGCGACC TCTTCACCGA GGATGGCGGC
GAGACCTGGA TCGATGCCGA GATTGCCCAG CGCATCGCGG GCGAGAAGCT GCAGGCCTTC
GCGACCCAGA TCGCCGAAAC CTCGGGTTAC GCCTGGGTGC GGCCGATCCT CGAGACCCGC
GTGACCTATG GCGCAACCGA AGACCTCCAC CAGGTCCACC TCGAACCCGC ACCGCTTTCT
GACGAGGAAC AGGCCGAAGC CGACCGCCTC ATGGAGACGA TCTCCGCGCT GGAAGCGGAA
AGCGACGGCG TCGACGAGGA CGATGAAGCG GCTGCCGCCG AATTCCAGGC CCGCTGGGAC
GCCGCAACCA ATGCCTACGA TGCGCTCCAC GACAAACCGC CGGTGATCCC CGAGGAGATG
AAGGCCAATG TCGGCTGCTT CGTCATCATC GGCGCCGACG GCGAACCGAC CGTGGCCAGC
GGCCTCTACA GCGACAAGCC GCTTGAGAAG CGCAAGGCGC GCGGCGGTGC AGATACGCAG
GGCGGCGCAG ACAGCGGGGC AGGGGAGGGC GCAGGCGCCG CCTCGGCACC CAAGCCGTTG
TCGCAGAAGC TGGTCGAGGA ACTCGCCGTC CAGCGCCGCG ACATCCTCGC GATCAACCTC
GCCTCCAACC CGGCGATCGC GCTCGACTAC CTGATCTTCG CGATCGCGGA TTCTCGCGCA
CTCTACAGCG CCCAGGCTCT CGGTACGACA CTGCGCGCCC CGTCGCCCTC GCTCTATCTC
ACCAACTATC CTGAGAGCCC GGCGCACACG CTGATGGCCG ACATGCGCGA GACGCTCGAT
CTTTCCTGGA CCGAGCACCG CCGCACGGTC GACAGGTTCG CCGCGTTCAG TGCGCTCGAC
GATGATGCCA AGGCGAGCTG GCTTGCCTGG TGCATGGCCA AGACACTCGA AGCGAGCTTG
GGCATCGACA AGAAAGTCGG CCAGTCCGGT CCCGAACCGA TCGACCTCCA CGATCACCTT
GCGACGCTGA TGGGGATCAA TGTCGCCAGC CATTGGCGGC CGACCTCGGC CAACTACTTC
GACCGCGTCA GCAAGCAGAC GCTGCTCGCC CATGTCAGCG AAGTCGGCGG TCCAACCATG
GCGGCGAGCT TCATGGGCTC GAAGAAGGGC GACCTCTCGG CGTCGTGCGA GAAACTGTTC
GCCGGCGAGA CCATCGTCGC GCCCGAGGTC AAGGAAGCTG CACTCGCCTG GGTACCCGAA
GCGATGCGGT TCCGCGCCAT CTCTCCCAGC GAGACCGACG ACGAGCAGGC GCCGATCGAA
GCTGGGGGCG AACCCGCGCC GGAAGGCGAG GGCGATGAAC TGGAGGCCAG CGAAGATCAG
GACGCCGAAG CGGCCGAGCC TGTCGACGCC TGA
|
|---|
| Protein sequence | MNDIEMIPLG KLRLSEANVR KNDSNLFIEE LAANIEAKGL LQNLIVAPAK KRGMFDVTAG
GRRLRALNFL LEAGKLAKDH PVACRVLDID AAEQSELSLI ENVIRLDMTP TDEIRAYKHF
VNEGSDLDAI AKRFGRTRRF IEGRLRLADL ADPIFAALEE GKITLDVAKA YATTPNHERQ
MLVWNELSNS WQGNQADSIR RMITHSAIRS SSPMAKLASE ADYLAAGGKI ERDLFTEDGG
ETWIDAEIAQ RIAGEKLQAF ATQIAETSGY AWVRPILETR VTYGATEDLH QVHLEPAPLS
DEEQAEADRL METISALEAE SDGVDEDDEA AAAEFQARWD AATNAYDALH DKPPVIPEEM
KANVGCFVII GADGEPTVAS GLYSDKPLEK RKARGGADTQ GGADSGAGEG AGAASAPKPL
SQKLVEELAV QRRDILAINL ASNPAIALDY LIFAIADSRA LYSAQALGTT LRAPSPSLYL
TNYPESPAHT LMADMRETLD LSWTEHRRTV DRFAAFSALD DDAKASWLAW CMAKTLEASL
GIDKKVGQSG PEPIDLHDHL ATLMGINVAS HWRPTSANYF DRVSKQTLLA HVSEVGGPTM
AASFMGSKKG DLSASCEKLF AGETIVAPEV KEAALAWVPE AMRFRAISPS ETDDEQAPIE
AGGEPAPEGE GDELEASEDQ DAEAAEPVDA
|
|---|
| |