Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3774 |
Symbol | |
ID | 5077922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_009427 |
Strand | + |
Start bp | 413328 |
End bp | 414146 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640481497 |
Product | extradiol ring-cleavage dioxygenase III subunit B |
Protein accession | YP_001166159 |
Protein GI | 146275999 |
COG category | [S] Function unknown |
COG ID | [COG3384] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.337373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAGGAG ACCCCAGCGT GAGCCGAGTG CCCACATTCT TCCTCAACCA CGGCGGCGGA CCCTGGCCGT GGATGGATGG CCCGATGCGG CAGGGCTACG ATCAGCTCGA GGCCTCGCTC AACGGTCTCC TGCCGTCGCT GGGACAGATG CCGAAGGCGG TTCTCGTCGT CTCCTCGCAT TGGGAAGAGG CGGAGCCGCG CGTCTCGTCC CATCCCAATC CGCCGATGCT CTACGATTAC TACGGCTTTC CGGAGCATAC CTACCACATC CGCTATGCCG CGCCGGGCAA CCCTGAACTG GCCGCAAGGA CGGTGGCGCT CCTGCGCGAA GGCGGGTTCG CGGCGGAGGA AGATGCTGGG CGGGGTTTCG ACCACGGTAC CTTTTCCCTC ATGCAGCCGA TCCGCCCCGA GGCAGACCTG CCGGTGGTGC AGCTTTCGGT GCTGGCAGAC TTCGATGCGC GCAGGCACAT CGCGATGGGC CGCCTGCTCG CGCCGTTACG CGACGAGGGC GTGCTGGTGA TCGGCTCAGG GCTCTCCTAC CATAACTTGC GCGCGCTTGG GCCGGCGGGG GCGGTGCCGT CTGCGCGGTT CGATCAATGG TTGCGCGACA GCCTTGTCGG CGTCGGCCAG GCCGAGCGAG AAGCGGCGCT TGCGCAATGG GAACAGGCAC CTGCCGCGCA CCAGGCCCAT CCCCGGCCGG AACACCTTGT GCCGCTGATG GTCGTCGCCG GGTCTGCCGG GGAAGACGCC TGCACCGTCC AGTTTCACCA GCCCGATTTC TTCGGCGGCA TCGCGGTCAC GAGCTTCCGT TTCGGCTAG
|
Protein sequence | MTGDPSVSRV PTFFLNHGGG PWPWMDGPMR QGYDQLEASL NGLLPSLGQM PKAVLVVSSH WEEAEPRVSS HPNPPMLYDY YGFPEHTYHI RYAAPGNPEL AARTVALLRE GGFAAEEDAG RGFDHGTFSL MQPIRPEADL PVVQLSVLAD FDARRHIAMG RLLAPLRDEG VLVIGSGLSY HNLRALGPAG AVPSARFDQW LRDSLVGVGQ AEREAALAQW EQAPAAHQAH PRPEHLVPLM VVAGSAGEDA CTVQFHQPDF FGGIAVTSFR FG
|
| |