Gene Saro_3648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3648 
Symbol 
ID5077796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp277208 
End bp278407 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content66% 
IMG OID640481371 
Productacyl-CoA dehydrogenase type 2 
Protein accessionYP_001166033 
Protein GI146275873 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTAG CACAAGCACA AGCCGTAAAG ACGCCGACCG TGGCAGACCT CGTGGCCCGC 
GCGGCCGCGA TGGTGCCGAC CCTGCGCGAG CGCGCGCCCG AGGCTGAGCG CGAATGCCGC
ATTCCCGCGC AGACGATCCG CGATTTCCAG GATGCCGGCT TCTTCCGCAT CCTCCAGCCC
GCCCGCTATG GCGGCTACGA GATGGACCCG CAGGCCTTCT ATGCAGTGCA GATGAAGGTT
GCCGAAGGCT GCATGTCGTC GGCCTGGGTG CTGGGCGTCG TGGCGGTCCA TAACTGGCAG
CTCGCCCTTT TCGATCCGCG CGCGCAGGAA GACGTCTGGG GCGACGATCC GGCGACGCTG
ATTTCCTCGT CCTACATGCC CAAGGGAAAG GTCGTGCCCG TCGACGGCGG CTATCGCGTC
TCGGGCCACT GGGGCTTTTC CAGCGGCATC GACCATTGCG AATGGGCCTT CCTCGGCGGC
CAGATGACCG ATCCTGAAAC CGGACGCCCG GATTTCGTGA CCTTCCTGAT CCCGCGCAAG
GACTTCACCG TCCTGCCGAT CTGGGACACG GTTGGTCTTG GCGCGACCGG CAGTCACGAC
GTGGTGGTCG AGGACGCATT CGTTCCGGCT TACCGGATGC ACCGCTCGAA GGATGGCTTC
GCGGTCACCA GTCCCGGTCT CAAGACCAAC GACGCGCCGC TGTTCCGCCT GCCCTTCGGC
CAGGTCTTCG TCCGCGCGGT TTCCTCCTCG TCGATAGGTG CGCTCCAGGG CGCGCTCGAC
CTGTTCCGCG AGGCGGGTGC GCGCCGCGTG TCGCACAACG ACGCCTCCAG CGCGGCGCAG
GACCCGGCAA CGCTGGAACT GATTGCTGAG ACGGCCTCCG CGATCGACGA GATGAAGGCC
ACGCTCAATC GCAATTTCGA TCACCTGATG GATGTCGCGC GCGCGGGAGG GCAGGCCGAT
GTCGAAACCC GCCTCACCTA TCGCTACCAG TCGGCCGAAG TGTCTGGACG CTGCGCCGCG
CTGGTCAGCC GCATCTTCCA CGCCTCTGGC GCGGAGGGAA TTTTCCGCAA CCGGCCGCTT
TCGCGGATCT TCTGCGACAT CCATGCCGGA CGGACCCACG TGGCCAACAA TCCGGCCAAG
GTCGGCCGCA ATTTCGGCGG CGTGCTGCTC GGCGCGCCGA ACATGGACAG CTTCATCTGA
 
Protein sequence
MTLAQAQAVK TPTVADLVAR AAAMVPTLRE RAPEAERECR IPAQTIRDFQ DAGFFRILQP 
ARYGGYEMDP QAFYAVQMKV AEGCMSSAWV LGVVAVHNWQ LALFDPRAQE DVWGDDPATL
ISSSYMPKGK VVPVDGGYRV SGHWGFSSGI DHCEWAFLGG QMTDPETGRP DFVTFLIPRK
DFTVLPIWDT VGLGATGSHD VVVEDAFVPA YRMHRSKDGF AVTSPGLKTN DAPLFRLPFG
QVFVRAVSSS SIGALQGALD LFREAGARRV SHNDASSAAQ DPATLELIAE TASAIDEMKA
TLNRNFDHLM DVARAGGQAD VETRLTYRYQ SAEVSGRCAA LVSRIFHASG AEGIFRNRPL
SRIFCDIHAG RTHVANNPAK VGRNFGGVLL GAPNMDSFI