| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3540 |
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| Symbol | |
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| ID | 5077689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | + |
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| Start bp | 157498 |
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| End bp | 159240 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640481264 |
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| Product | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein |
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| Protein accession | YP_001165926 |
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| Protein GI | 146275766 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAGC CCACCAAGGG TATCGACCGC CGGCAGATGC TTACCGGAGC AGGCGTGGCG
GCGGCGGTCG CCGCGACCGG CGGCATCGCC ACGGCGGCAC AGGCTGCGGA CGCGCCCGCT
TCGGGCTGGG ACCATGAATG CGACGTCCTG TGCGTCGGCA GCGGCGCGGC GGCGGGAACG
GCCGCCGTCA CCGCGCTGGC GGCGGGCGCG AAGGTGATGA TGGTCGAGAA GATGCCGATC
CTTGGCGGCA CCACCGCCAA GTCGGGCGGC GTGACCTGGA TCTTCAACCA CTTCGTGTTC
CGCGAACAGG GGATCGAAGA CCCCAAGGCC GATGCGCTGC GCTACACCGT GCGCTATGGC
TATCCGCGCC AGTACAACCC CAACAGCCCG ACGCTGGGCC TCGACGAAAA CCGCTACAAG
GTGGTCGAGG CGTTCTACGA TCACGGTTCG GCGGCGGTCG ATCACCTGCG CGAACTGGGC
GCGGTGCAGT TCAAGCAGTT TCGCCTGTTC CAGGTGGACA AGCCCGCGCC CGACTATGCC
GACCACCTGC CCGAGAACAA GGTGCCGACT GGCCGCGCGC TGGAGCCGGC GGTCGGCTCC
GGGTCGACGC AGGGCGGCGG CAGCCTTGCC TCGCAGATGC ATGCCTATCT GAAGGGCAAG
GGCGTGCCGA TCCTGACCCG CACCCGCGTG ACCAAGCTGG TCAAGGACGC ATCGGGCCGG
GTCATCGGCG TCGAGGCGAG GCAGGGCGAC AAGACCATCC GCATCAGGGC CGCCAGGGGC
GTCGTTTTCG GCACCGGCGG GTATAGCCAC AACGTCCAGC TATGCGACGT GCACCAGCCT
GCGGTCTATG GATCGTGCTC GCTGCCCGGA TCGACCGGCG ACTTCATTCC GATCGCGCAG
GAAGCCGGCG CGATGATGGG CAATCTCGGG CTTGGCTGGC GCACGCAGGT CGTGCTGGGC
GAGGCGCTGA AGACGCGCGG CATCGGGCTG GGCGCATTCG TGCTGCCGGG GGATTCGATG
ATCCTCGTCA ACAAATACGG CAAGCGCGTG GTCAACGAGA AGCGCGACTA CAACGACCGT
ACGCAGGCGC ACTTCAGCTA CGACCCGGCG CACGAGGAAT ACCCGAACCA CCTGATGTTC
ATGCTGTTCG ACGAACGCAG CATCGATGCC TTCGGCGGGG CCTTCCCCTT CCCGGTCAAC
AAGGCCGAGC AGCCGCACCT TGTGGAAGGC GCGACGTGGG ACGAGGTCTT CGGCAAGATC
GACGCCCAGC TCGCCCAGTG GCAGGACCGC ACCGGCGGCG TGCGCCTTGC GCCGGAGTTC
GCTGGCAACG CGAAGCAGTC GATCACGAGC TTCAACGCCT ATGCCAAGAA AGGCGTCGAT
CCGGAATTCG GGCGTGGCAA GTATCTCTAC GACCGCGAAT GGCACCTCCT GTTCTCGGCC
CGTCGCGCCG GCACGGCGCA GCCTGAAAAT CCCTATCCGA ACAAGACGAT GCACCCCTTC
GCCGCCAAGG GTCCGTTCTA TGCGCTGATC CTTGCCCCGG GTACGCTCGA TACGGCGGGC
GGGCCGCAGA TCAATGCCGA TGCGCAGGTT CTGGCCGCGA ACGGGCAGCC CATCCCCGGC
CTCTACGCCG CGGGCAACTG CATCGCCGCG CCCACCGGGC AGGCCTATCT CGGCGCGGGC
GGCACAATCG GTCCGGCAGT GACCTTCGGC TACATCGCGG GCAAGCACGC GGTGTCGGCA
TGA
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| Protein sequence | MTQPTKGIDR RQMLTGAGVA AAVAATGGIA TAAQAADAPA SGWDHECDVL CVGSGAAAGT
AAVTALAAGA KVMMVEKMPI LGGTTAKSGG VTWIFNHFVF REQGIEDPKA DALRYTVRYG
YPRQYNPNSP TLGLDENRYK VVEAFYDHGS AAVDHLRELG AVQFKQFRLF QVDKPAPDYA
DHLPENKVPT GRALEPAVGS GSTQGGGSLA SQMHAYLKGK GVPILTRTRV TKLVKDASGR
VIGVEARQGD KTIRIRAARG VVFGTGGYSH NVQLCDVHQP AVYGSCSLPG STGDFIPIAQ
EAGAMMGNLG LGWRTQVVLG EALKTRGIGL GAFVLPGDSM ILVNKYGKRV VNEKRDYNDR
TQAHFSYDPA HEEYPNHLMF MLFDERSIDA FGGAFPFPVN KAEQPHLVEG ATWDEVFGKI
DAQLAQWQDR TGGVRLAPEF AGNAKQSITS FNAYAKKGVD PEFGRGKYLY DREWHLLFSA
RRAGTAQPEN PYPNKTMHPF AAKGPFYALI LAPGTLDTAG GPQINADAQV LAANGQPIPG
LYAAGNCIAA PTGQAYLGAG GTIGPAVTFG YIAGKHAVSA
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