Gene Saro_3513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3513 
Symbol 
ID5077662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp124363 
End bp125379 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content67% 
IMG OID640481237 
ProductLacI family transcription regulator 
Protein accessionYP_001165899 
Protein GI146275739 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.98216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGAAGG CAAAGGACGG CAAGCCGACG ATCAACGACG TCGCGCGCAT CGCCGGCGTT 
TCCAAGAAGA CGGTCAGCCG GGTCATCAAC CGCTCGCCCC TGCTGAACGA AGCCACGCGC
GAAAAGGTCG AGGCGGTGAT CGCGGAACTG GGCTATGTGC CCAATCCCCA GGCGCGCGCG
CTGGCGCTGC GGCGCAACTT CCTGATCGGC CTCATCCATG ACAACCCGAA CGCGCAAATG
GTGCTGGGCG TGCAGGAGGG CATCCTCTCC GCGATTCGCG ACACCGAGTT CGCGCTGGTC
GTGCGCCCGG TGAACCGCCG CTCGCCCGAC ATGCTGGACG ACGTTCGCGC CTTCCTCGAA
CAGCAGCGGC TGTTCGGCGT CATGCTGCTG CCGCCGATAT CCGAAAACGA CGCACTGGCC
GACCTGTGCG AGGACCTTGG CGTGACCTAC GTGCGCATGG GTTCGGTCCG GCTGGACGAC
GACGAGCACA TGGTCGCCTC GAACGACCGC GAGGCCGTTG CCCGGGCAGT GGCCTATCTC
GTCGATCACG GACATCGCCG CATCGGCTTC GTCGCCGGTC CCGATGGCTT CCGCTCCGCC
GCGGAGCGCG CGTCGGGCTA TGTGGACGCG CTCGAAACTG CCGGCATCAA GCAGGATGCG
ACGATCATGG CCGAAGGCAA CTATACCTTC GAGACCGGCA TCGCGGCGGG CGAGAAGCTG
CTCGCCGCCT CCCCTCGCCC CACCGCGATC TTCGCCAGCA ATGACGAAAT GGCGGCGGGT
GTACTTCACG CTGCCCGCAA GAAGGGGCTG TCGGTGCCCG AGGACCTGTC AATCGTGGGT
TTCGACGACA CCGCAATCGC CGCCCATATC TGGCCGCCAC TGACGACGGT GCGGTGGCCG
ATCCAGGCCA TGGCCAAGGC GGCGGCGATC AAGCTGATCG ACCCTGCCGA GGCGCGGCGG
CAACCTTCCC ACTTCCTCTC GGACCTCATC GAACGCGCCT CGGTCGGCAC GGCCTGA
 
Protein sequence
MKKAKDGKPT INDVARIAGV SKKTVSRVIN RSPLLNEATR EKVEAVIAEL GYVPNPQARA 
LALRRNFLIG LIHDNPNAQM VLGVQEGILS AIRDTEFALV VRPVNRRSPD MLDDVRAFLE
QQRLFGVMLL PPISENDALA DLCEDLGVTY VRMGSVRLDD DEHMVASNDR EAVARAVAYL
VDHGHRRIGF VAGPDGFRSA AERASGYVDA LETAGIKQDA TIMAEGNYTF ETGIAAGEKL
LAASPRPTAI FASNDEMAAG VLHAARKKGL SVPEDLSIVG FDDTAIAAHI WPPLTTVRWP
IQAMAKAAAI KLIDPAEARR QPSHFLSDLI ERASVGTA