| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3466 |
|---|
| Symbol | |
|---|
| ID | 5077615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009427 |
|---|
| Strand | - |
|---|
| Start bp | 67132 |
|---|
| End bp | 67638 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640481190 |
|---|
| Product | protein tyrosine phosphatase |
|---|
| Protein accession | YP_001165852 |
|---|
| Protein GI | 146275692 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0394] Protein-tyrosine-phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGC GTCCATTCTC GATCCTTGTA CTCTGCACGG GCAATTCCGC GCGGTCCATC
CTGGGCGAGG CCATTCTCGC CGCGAAAGGT GCCGGACGGA TCGCAGCCTT CAGCGCCGGC
AGTAAGCCGA AGGGCGTCCC GCACCCGGGC GCCCTCCGCC TCCTCGCGCG AAAGGGAATT
GATGTCGCGC CGTTCCGCTC GAAGAGCTGG AACGAGTTCA CTGGCCCGGA TGGCCCACCC
ATCGACCTTG CCATAACCGT TTGCGGCAAT GCGGCGGGCG AGGCCTGCCC GGTATTCATG
GGCGCTCCGC TCAAGGCGCA CTGGGGCTTG CCAGATCCCG CCGATGTCAC GGGCGGTGAG
GCGGCCGAAG ATGCCGCATT CGAGCAGACC TGGCGGTGGC TCGACATGCG GGTGGCCGCG
CTGCTCGACC TGCCGTTCGA AACGATGGAC AGTACACAGC TTTCCGCCCG GCTCGCCGAG
ATCGGACAGA TGGAAGGAGC CGCCTGA
|
|---|
| Protein sequence | MSQRPFSILV LCTGNSARSI LGEAILAAKG AGRIAAFSAG SKPKGVPHPG ALRLLARKGI
DVAPFRSKSW NEFTGPDGPP IDLAITVCGN AAGEACPVFM GAPLKAHWGL PDPADVTGGE
AAEDAAFEQT WRWLDMRVAA LLDLPFETMD STQLSARLAE IGQMEGAA
|
|---|
| |