| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3331 |
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| Symbol | |
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| ID | 3915978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 3551124 |
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| End bp | 3552656 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640446116 |
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| Product | peptidase S1C, Do |
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| Protein accession | YP_498600 |
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| Protein GI | 87201343 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.107916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGATACG CTTACGGTGT GACTTCGGCG CTGCTGCTCG CAGGCAGCGC ACTGACCCTG
GTGACGGGTT TTCCGGCAGG TGCGCAGGTC GCGCAGAACG ACCAGTCCGA GATGCGGACG
GTCGTGCCAC GCGCGGGCGC CCCGGCAAGT TTTGCAGACC TTACCCAGCA ACTCCAGCCG
GCGGTCGTGA ACATCTCCAC CCGCCAGCGC GTGAAGGTGC AGGCCAACAA CCCCTTCGCC
GGCACGCCGT TCGGCGACCT GTTCGGCGGC GGACAAGGCA ACGGCCCGCA GACGCGCGAG
GCTCAGTCGC TGGGTTCGGG CTTCATCATT TCCGCTGACG GCTATGTCGT GACGAACAAC
CACGTCATTA CCGCCGACGG GCAGGGCGAG GTCGAATCGA TCACCGTCAC CACCCCCGAC
GGCACCGAAT ACCCGGCCAA GCTTATCGGC AAGGACGCGG CATCGGACCT TGCCGTGCTC
AAGATCAGCC GCCCCACCGC CTTCCCGTTC GTGAAGTTCG GCGATTCGCG CAAGGCACGC
GTGGGTGACT GGGTGATCGC GATCGGCAAC CCGTTCGGAC TCGGTGGCAC GGTCACGCAG
GGGATCATCT CGGCGGTCTA CCGCAACACC GGTTCGGGTT CGGCCTATGA CCGATACCTG
CAGACCGACG CGTCGATCAA CCGGGGCAAC TCGGGCGGTC CGATGTTCGA CATGCAGGGC
AACGTGATCG GCATCAACAA TGCGATCTTC TCGCCCACCG GCGGTTCGGT CGGCATCGGT
TTCGCCATCC CCGCCGAAAT CGCCGCCCCC ATCGTGGACA AGCTGCGCGC AGGCCAGGCG
ATCGACCGCG GTTACTTGGG CGTGCGCATC CAGCCGCTTT CGGAAGACCT TGCGGCCTCG
CTTGGCCTGC CCAAGAACCG GGGCGAGTTC ATCCAGGGCG TCGAGCCCGG CCAGGCTGCG
GCCAAGGCTG GCATCCAGGC GGGCGACGTC GTGGTCAAGG TCGACGGCAA GGACGTGACG
CCAGACCAGA CCCTGTCGTT CATCGTGGCC AACACCGCGC CCGGCAAGCG CATCCCGATC
GAGCTGATCC GCAACGGCCA GCGCCTGACG GTGCAGACCG TCGTCGCCAA GCGTCCGACC
GAGGAGGAAC TCGCCCAGCA GAGCTTCGAC CCCGATGCCC AGCAGGACGA CGACCAGTTC
GGCGCTCGCC CGCAGCAGCA GGGGCCCAGC GTTCTCCAGA ACGCGCTCGG CGTCGCAGCG
ATCCCGCTGA CCCCGCAGAT CGCACGCCAG CTTGGCGCGG GCGAGGATGC CAAGGGCGTC
GTAATCACGG CGGTCGACGG ATCGTCCGAT GCCGCGGCCA AGGGCCTGCA GCGTGGCGAC
ATCGTGCTTT CGGCCAACTA CGTCACGGTT ACCACCTTGG CCGATCTCGA ACGGATCGTG
CGCAACGCCA AGACCGAAGG TCGTGAAGCG GTGCTGCTGC GCATCCAGCG CCGTGGCCAG
CCACCCATCT ACATGCCTGT CCGCGTGCGC TGA
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| Protein sequence | MRYAYGVTSA LLLAGSALTL VTGFPAGAQV AQNDQSEMRT VVPRAGAPAS FADLTQQLQP
AVVNISTRQR VKVQANNPFA GTPFGDLFGG GQGNGPQTRE AQSLGSGFII SADGYVVTNN
HVITADGQGE VESITVTTPD GTEYPAKLIG KDAASDLAVL KISRPTAFPF VKFGDSRKAR
VGDWVIAIGN PFGLGGTVTQ GIISAVYRNT GSGSAYDRYL QTDASINRGN SGGPMFDMQG
NVIGINNAIF SPTGGSVGIG FAIPAEIAAP IVDKLRAGQA IDRGYLGVRI QPLSEDLAAS
LGLPKNRGEF IQGVEPGQAA AKAGIQAGDV VVKVDGKDVT PDQTLSFIVA NTAPGKRIPI
ELIRNGQRLT VQTVVAKRPT EEELAQQSFD PDAQQDDDQF GARPQQQGPS VLQNALGVAA
IPLTPQIARQ LGAGEDAKGV VITAVDGSSD AAAKGLQRGD IVLSANYVTV TTLADLERIV
RNAKTEGREA VLLRIQRRGQ PPIYMPVRVR
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