| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3313 |
|---|
| Symbol | |
|---|
| ID | 3915960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 3535002 |
|---|
| End bp | 3536780 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640446098 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_498582 |
|---|
| Protein GI | 87201325 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGCCGA CCCAGGCCTG GAAAGTTCTC GGAATTGCGC GGACGCCCGA AGTCGCGGCC
ATACGGCGGG CCTATGCCGA CCGGCTGAGG GCGATGGACG TGGATCGTGA CGTCGACGGC
TATGCCCGCC TGCGCGAGGC GCGCGACGCC GCGCTTCGCT GGGCGCGGAT GCAGGAGAAG
CCGGCGGGCG ACGACTTCGA CCAGTTTGCC GGCATCGAGG CGCCAGCGAA GCCCGAGGGC
GAGGCCGCAC CAGAGGCCGC ACCCGCCGAG GCATCGACCT GGCTCTACGC CGCGCCCGAG
GCAAAGGGCG AATCCGATCC GAACCTGACC ACCCGGATCG GCGAGGCCGC GCCCCGGCTG
GACGTGACGC CGGGCTTCGT CCCGGCACAG GCCCCTGCCG AGCAGGCGAT CGAGGTCACC
CGCGATCCCT TCGCGCGGCC GGTCCTGCTG GGTCTCGAAC CCACTTCGGA CGCGGTCATG
CCCGCCTGGG CGCACGAACA GGCGCTTCAC CGGCTGCTCC TGCCGGAGAC CGAGTCCGAT
GAGCTTCCGC CGTTGCAGGG GTGGGAAGAA GCGATGGCGC GCGGGCACCT CAAGGCGGTG
CTGCGCAACG CCGAGACGGT AAGCGTCACC GCCTTCGACG AGGTCGACAA CTGGCTTGCC
CAGATCCTCG CGCGATCGTG GCCCCGCTCG GCACCCTTGC TCGAGCCTGC GGCGGCGGTG
TTCGGGTGGG AGGGCGAGCG GGGGCTTGTC AGCGAACGCC CGGCGGTCGC GTTTCTCAAC
GCGCGCCTGC GCGGTCTTCG CTTCCACGAA ATGATCCAGG ACCCCGCCCA CCCGCTGCAC
AAGGCGTGGA AGGAACTGAC AACGCCCGCG CAGCAGGGCA GCCGCCGTGG CTGGTTCGTC
AAGCGCGCCG ATGTGCAGCA GTTGCTCGAG GGGGTGCGCA AGAACTTCCC GGAACTCGAG
CATCACTTCG ACCCCTGGCG CGTTGCGCTG TGGGAACAGC AGGTGGGCGA CAGCGTCGGG
CAGAGCTGGT TCAGCAAGAC CCGACTGGCG ATCTTCGCCG CCATCATCCT TGTGCAGATC
GCTCGTTTTG CATTCGATGA CAGGCCGACC AGGCAGGCCC AGCCCCAGCC TGTCGCGCTT
TCGGCCAGCG AAACCTCGCA TGACAAGGAT GTGATCGCTC GTGCGCTGGG CTCGATCTTC
GGCGCGGAGA TCACGTTCGA CGGGCTCCAG TCGCTCCAGC CCGATCTGGC GGCTGCCTTT
TCCGCCAATC GCACGGTGGC CCGCTCGCAA GGGGACAGCG ACGCGGTCTA TGTCGCCCGG
GTGCACGATC TGGTGCGCGA GCGCATGTAT GCCACTGCGC TGGTCCAGAA GGGGCAGCTC
CTGGCCGACG TGCAGCGCAT CCGCGCCGAT ATCCTGCGCG CGGCGCGAAA GACCGGGGCG
GCCGAGTGCA TGGCGTTCGT CCGTACCCGC AGGCTCGCTC CGCAGGTGAG CCTGCCTGTG
GCGGCGCAAC TGCGCGAACG CGATCTGGCG GTGCGGATGC TCGACGCGCG CCAGCTTGGC
CCGCCCGCCC GGGTCGTGCC CGGCAACGCC AGCGTCCCGG GCGACCTGAT CGAGAAGGTC
ATCGCGGCGA CCGGCATTCC CGATGGCCGG GTGCGGACGG CGATGAAGGG GCAGGGGCCG
GACGAGGACC AGTGCGCCGT CACGATCGCT CTGATCGACC AGACCCTTGG CTGGAAGGGG
CCGGTCGCGC AGCGCGAGGC GATCCTTTCG GTCCTGTGA
|
|---|
| Protein sequence | MTPTQAWKVL GIARTPEVAA IRRAYADRLR AMDVDRDVDG YARLREARDA ALRWARMQEK
PAGDDFDQFA GIEAPAKPEG EAAPEAAPAE ASTWLYAAPE AKGESDPNLT TRIGEAAPRL
DVTPGFVPAQ APAEQAIEVT RDPFARPVLL GLEPTSDAVM PAWAHEQALH RLLLPETESD
ELPPLQGWEE AMARGHLKAV LRNAETVSVT AFDEVDNWLA QILARSWPRS APLLEPAAAV
FGWEGERGLV SERPAVAFLN ARLRGLRFHE MIQDPAHPLH KAWKELTTPA QQGSRRGWFV
KRADVQQLLE GVRKNFPELE HHFDPWRVAL WEQQVGDSVG QSWFSKTRLA IFAAIILVQI
ARFAFDDRPT RQAQPQPVAL SASETSHDKD VIARALGSIF GAEITFDGLQ SLQPDLAAAF
SANRTVARSQ GDSDAVYVAR VHDLVRERMY ATALVQKGQL LADVQRIRAD ILRAARKTGA
AECMAFVRTR RLAPQVSLPV AAQLRERDLA VRMLDARQLG PPARVVPGNA SVPGDLIEKV
IAATGIPDGR VRTAMKGQGP DEDQCAVTIA LIDQTLGWKG PVAQREAILS VL
|
|---|
| |