Gene Saro_3256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3256 
Symbol 
ID3917514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp3476471 
End bp3477151 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content72% 
IMG OID640446040 
Producturacil-DNA glycosylase 
Protein accessionYP_498525 
Protein GI87201268 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTCT CCTTGCCCGC AGACTGGCGC GCCAGCCTCG AACCCCTGCT TGCCTCGCCC 
CCCTTGCGCG CACTGGGCGA CTTCCTCGAC GCGGAGGAGC GGGCCGGCAA GACGATCTAC 
CCTCCCGCGA CGCAGCGCCT CGCCGCTCTG GAGATGACCC CGCTGGACAA CGTGCGCATC 
GTGATCCTGG GGCAGGACCC CTACCACGGC CCCGGCCAGG CGCACGGCCT CGCCTTCTCG 
GTCCAGGACG GGGTCAAGGT CCCGCCGAGC CTTGCCAACA TCTACAAGGA ACTGGAGGCC 
GACCTCGGCC TGCCCCGCCC GCCCCACGGC AACCTCGCAC GGTGGGCGCG GCAGGGAGTG 
CTGCTGCTCA ACAGCGCACT GACGGTCGAG GCGGCAAGCG CCGGCTCGCA CCAGGGCAAG 
GGCTGGGAGG CCCTGACCGA CGCCGCCATC GCCGCCGTCG CCGCGCGCGA CGTACCGACG 
GTGTTCATGC TCTGGGGCAG CCACGCGCAG AAGAAGGCGG CGCGCGTCGC CCGCCTGGCC 
AGCGGCCCCC ACCTCGTGCT CGAAGCCCCG CACCCCAGCC CGCTCTCGGC GCACAAGGGG 
TTCCTCGGAT GCCGCCATTT CAGCAAGGCC AACGCCTTCC TCGAGGCGCA CGGGCGGCGC 
GCGGTGGACT GGCGGATCTG A
 
Protein sequence
MNLSLPADWR ASLEPLLASP PLRALGDFLD AEERAGKTIY PPATQRLAAL EMTPLDNVRI 
VILGQDPYHG PGQAHGLAFS VQDGVKVPPS LANIYKELEA DLGLPRPPHG NLARWARQGV 
LLLNSALTVE AASAGSHQGK GWEALTDAAI AAVAARDVPT VFMLWGSHAQ KKAARVARLA 
SGPHLVLEAP HPSPLSAHKG FLGCRHFSKA NAFLEAHGRR AVDWRI