Gene Saro_3118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3118 
Symbol 
ID3918160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3331159 
End bp3332481 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content70% 
IMG OID640445902 
Producthypothetical protein 
Protein accessionYP_498387 
Protein GI87201130 
COG category[S] Function unknown 
COG ID[COG5323] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACG GCCCCCTGGT GGAGTGGGTG CCCGAAGTGG ACGCGGACGA AATCGGGTCG 
CTGATCAAGC GCATCAACGA GAGGGAGATC GAGGAGTGGC CCCACGACTG GGCCGTCTGG
GGCCGGCAAA GCCAGCAGGC CCCGCCAAGC GACTGGCGCG TGTGGCTGGT CATGGCCGGA
CGCGGGTTCG GCAAGACCCG GCTGGGCGCG GAATGGGTCC GCAAGATCGC CGAGGAGGAC
CCCGAGGCGC GGATCGCGCT GGTTGGCGCA TCGCTCCACG AGGCGCGCAG CGTGATGGTG
GAGGGCGAGA GCGGACTGCT GTCGATCGAC GCGCCATGGC GGCGGCCGGT GTTCGAGAGT
TCGGTTCGCA GGCTGGTCTG GCCCAACGGG GCCCAGGCGT TCCTCTATTC CGCAGGCGAG
CCCGAATCGC TGCGCGGGCC GCAGCACAGC CATGCCTGGT GCGACGAGAT CGCCAAGTGG
GACAATGGTT CCAACCGCGC GATGGCGACC TGGGACAACC TGCTGATGGG GCTGCGGCTG
GGCCGCGACC CGAGGCTGGT GGCGACGACG ACGCCGCGTC CGGTGCCGCT GGTCGCCCGG
ATCATGGACG AAGGCGACGA CGTGGTCGTG ACGCGCGGCA GCACTTTCGA GAACCAGGAC
AACCTGCCCC GGCGCTTCGT CGAGGCCATG CGCCGCACGT TCGGCGGGAC AACGCTGGGC
CGGCAGGAAT TGCTGGGCGA GATGATCGAG GATCTGGTGG GCGCGCTGTG GAGCCGTGCG
CTTATCGAGA ACGCCCGCGA GGACGCGGCG CCGGCGATGA CGCGCGTGGT CGTGGGGGTC
GATCCCCCGG CGAGCGCGCA TGGCGACGCC TGCGGCATCA TCGTCTGCGG AATCGGGGAT
GACCGGATTG CCCGGGTGCT GGCCGACTGC TCGGTCGAGC AGGCAAGCCC CGAGCGATGG
GCCCGCGCCG TTGCCAATGC CGCCCGCGCA TGGTCGGCGG ACAGGGTCGT GGCCGAGGCG
AACCAGGGGG GCGAGATGGT GGCCGCAGTG CTGCGCGCCG CCGAAGCTTC ACTACCGCTG
CGCCTTGTCC ACGCGAGCCG TGGCAAGGCG GCGCGGGCAG AGCCGGTGGC GGCGCTCTAC
GAAGCGGGTC GCGTGCGCCA TGCGGGGATG TTCCCGCAGC TTGAGGACGA ACTTTGCGGG
CTCATGCCCG GTGGCGAATA CCAGGGACCG GGGCGCAGTC CGGACAGGGC AGACGCCTGC
GTCTGGGCGC TGACCGAACT GATGCTCGGC CAGACGGCAG AACCGCGCAT CTGGTTCGAC
TGA
 
Protein sequence
MTDGPLVEWV PEVDADEIGS LIKRINEREI EEWPHDWAVW GRQSQQAPPS DWRVWLVMAG 
RGFGKTRLGA EWVRKIAEED PEARIALVGA SLHEARSVMV EGESGLLSID APWRRPVFES
SVRRLVWPNG AQAFLYSAGE PESLRGPQHS HAWCDEIAKW DNGSNRAMAT WDNLLMGLRL
GRDPRLVATT TPRPVPLVAR IMDEGDDVVV TRGSTFENQD NLPRRFVEAM RRTFGGTTLG
RQELLGEMIE DLVGALWSRA LIENAREDAA PAMTRVVVGV DPPASAHGDA CGIIVCGIGD
DRIARVLADC SVEQASPERW ARAVANAARA WSADRVVAEA NQGGEMVAAV LRAAEASLPL
RLVHASRGKA ARAEPVAALY EAGRVRHAGM FPQLEDELCG LMPGGEYQGP GRSPDRADAC
VWALTELMLG QTAEPRIWFD