Gene Saro_3101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3101 
Symbol 
ID3918143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3319699 
End bp3320157 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content61% 
IMG OID640445885 
ProductTraR/DksA family transcriptional regulator 
Protein accessionYP_498370 
Protein GI87201113 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02420] RNA polymerase-binding protein DksA 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGGG TCTTGAGTGA CGAGATTGAC GTTCTGGCAA AAGCGCGTCG TGCGATGCCG 
GGCGATTATG TTCCAAGCGA CGACGAACCC TATATGAATG ATGCCCAGCA GGACTATTTC
CGTCGCCTGC TGCTGGAATG GAAGAAGTCG ATCCTCTCGG CCGCGGCGGG CACGCTGACC
GCGCTCCAGG ATGGTCCGAT CCGCGAACCC GACCTCAACG ACCGCGCCTC GAGCGAGACC
GACTGGGGCA TCGAACTGCG CACACGCGAT CGCCAGCGCA AGCTGATCGC CAAGATCGAT
TCCGCCATGC GCCGGATCGA CGAAGGCGAA TATGGTTACT GCGAAGTCAC GGGTGAGCCC
ATCGGTCTGG GCCGACTGAT CGCCCGGCCT ATTGCCACGA TGACCGTCGA GGCGCAGGAA
GCCCATGAAC GCAGGGAAAA AATTTCCCGG GACATGTGA
 
Protein sequence
MAGVLSDEID VLAKARRAMP GDYVPSDDEP YMNDAQQDYF RRLLLEWKKS ILSAAAGTLT 
ALQDGPIREP DLNDRASSET DWGIELRTRD RQRKLIAKID SAMRRIDEGE YGYCEVTGEP
IGLGRLIARP IATMTVEAQE AHERREKISR DM