Gene Saro_3061 details

Gene Information

• Locus tag: Saro_3061
• Symbol: pyrB
• ID: 3916675
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 3279684
• End bp: 3280709
• Gene Length: 1026 bp
• Protein Length: 341 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640445843
• Product: aspartate carbamoyltransferase catalytic subunit
• Protein accession: YP_498330
• Protein GI: 87201073
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0540] Aspartate carbamoyltransferase, catalytic chain
• TIGRFAM ID: [TIGR00670] aspartate carbamoyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.280506
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAAGCC AGAACACCCC AGCAGCGGGC CGCTATCCAG CGGGCGGCCT CGCCTTCCCG 
CACCGTGACC TGACCGGCAT CGGCCAGCTT GCGCGCCACG AGATTCTCTA CCTCCTCGAC 
GAGGCGGAAC AGTGGGTGGA ACTGAACCGG CAGAGCCAGA AGACGACCGA TCTTCTCAAC 
GGCCTGACGA TTATCAACGC CTTCTTCGAG AACTCGACCC GCACGCTGCT GAGCTTCGAG 
ATCGCGGGCA AAAGGCTGGG CGCGGACGTG GTCAACATGC ACGCCGCCAC CAGCAGCGTG 
AAGAAGGGCG AAACGCTGAT CGACACGGCG ATGACGCTCA ATGCCATGCG CGCGGACGCA 
ATCGTCATCC GTCACGCCAG TTCGGGCGCG GTGCGCCTCA TCGCGGAAAA GGTGGACTGC 
CCGGTGCTGA ATGCCGGCGA CGGACAGCAC GAGCACCCGA CGCAGGCCCT GCTCGATGCG 
CTGACGATGC GCCATGCGAT GAAGCTGCCC GCAGGATCGG ACCTCAATGG TCTGAAAGTG 
ACGATCTGCG GGGACATCCT GCACAGCCGC GTGGCGCGAT CCAACATTCT GAGCCTGACC 
GCCCTGGGCG CGGAAGTCCG CGTATGCGCG CCTCCCGCGC TGATGCCGGC CGAGATCGAG 
GCAATGGGCG TGACGCCCTT CCACGACTTC GACGCGGCGC TCAAAGGGGC CAACATCGTG 
ATGATGCTGC GCCTTCAGCA GGAGCGCATG TCGGGACAGT TCATCCCCTC CCCGCGCGAG 
TATCGCCACC TCTACGGGTT GACGCCCGAA CGGCTGGCCA GGGCGGAGGC CGACGCTTTC 
GTGATGCATC CCGGGCCGAT GAACCGCGGC ATAGAGATCG ATTCGACCGT GGCGGACCAT 
CCCACGCGCA GCCTGATCAC GCGGCAGGTC GAAATGGGTG TTGCCATCCG CATGGCCTGC 
CTCGAGGTGC TGACGCGGCG GGCACGGCGC ACCCCGGGCT GGGAAGCGGA AGGAGCCTCG 
GCATGA 

 

Protein sequence

MQSQNTPAAG RYPAGGLAFP HRDLTGIGQL ARHEILYLLD EAEQWVELNR QSQKTTDLLN 
GLTIINAFFE NSTRTLLSFE IAGKRLGADV VNMHAATSSV KKGETLIDTA MTLNAMRADA 
IVIRHASSGA VRLIAEKVDC PVLNAGDGQH EHPTQALLDA LTMRHAMKLP AGSDLNGLKV 
TICGDILHSR VARSNILSLT ALGAEVRVCA PPALMPAEIE AMGVTPFHDF DAALKGANIV 
MMLRLQQERM SGQFIPSPRE YRHLYGLTPE RLARAEADAF VMHPGPMNRG IEIDSTVADH 
PTRSLITRQV EMGVAIRMAC LEVLTRRARR TPGWEAEGAS A