| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3004 |
|---|
| Symbol | |
|---|
| ID | 3917440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 3221762 |
|---|
| End bp | 3223216 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640445783 |
|---|
| Product | Phage uncharacterized protein-like |
|---|
| Protein accession | YP_498273 |
|---|
| Protein GI | 87201016 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5410] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01630] phage uncharacterized protein (putative large terminase), C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCTGA CGCCTGACGA CCTGAAAGCC TGCGAGGTAG AGCTTGCCCG CCGTTCACTG
GCCGACTTTG CGCGCATGGC GTGGCCGGTT CTGGAACCTG CAACTCCGCT CAAGTGGGGA
TGGGCCTTGG ACGCCATCTG CGAACATCTG GAGGCAGTTT CGAGAGGAGA GAGCAAGCGC
TTGCTGATGA ACGTGCCGCC CGGCTCTATG AAGTCGCTTT TGACAGGCGT TATCTGGCCT
GCGTATGAGT GGGGGCCGAT GGACCATGCC GAGATGCGCT TCCTCGGCAC AGCGCACAAG
CAAGACCTTG CTGTCCGCGA CAACCTGAAG TGCCGTCGCC TGATCCAGTC GCAATGGTAT
CAGGAGCGGT GGCCCGTTGT CCTGACCAGT GACCAGAACG CCAAGACCAA GTTCGAGAAC
GCGCGAACAG GCTTTCGCGA GGCTATGGCA TTCGAGAGCA TGACCGGTTC GCGTGGTGAC
AGGGTGATCT TGGACGACCC ACACAGCGTG GACGATGCGA ACAGCGCGGC CAAACTTGCC
AGTGGCGTGA CGACGTTTCG TGAGGCCCTG CCAAGCCGTG TGAACAATGA TCAGTCTGCA
ATCGTGATCG TCATGCAGCG CTTGAACGAG GCGGACGTAT CGGCGGTAGC AATCGACCTC
GGCTACGATC ATCTTTGCAT TCCGATGCGA TATGAGCCGG GACGGTCGAA GTGGGTCTAT
GGCTCCGGTG ATCCGCGCAA GGAAGAGGGG GAGTTGATGT TCCCCGAGCG CTTCCCCGAG
GAACAGGTAT CAGAGCTTGA GAAGACCATG GGCAGCTATG CCGTTGCGGG CCAGCTGCAG
CAGCGCCCTG CGCCGCGTGG TGGTGGTATC ATCAAGACTG CATGGTTCCG CTCATATCGG
GAGCTTCCTG CCTTGGAGTG GCGGCAAATC CATGCAGACA CCGCGCAAAA GACGGGCGAG
GAAAACGACT ACAGCGTGTT CCAGTGCTGG GGCCGAACGA CAACCGGCCA GGCGGTATTG
ATCGACCAGA TACGCGGCAA GTGGGAGGCT CCCGACCTCC TGACGCAGGC CCGCGCATTC
TGGTTGAAGC ACAAGAGCAT TCCCGGCCCG GTTCTTCGCG CGATGAAGGT CGAGGACAAG
GTATCTGGCA CGGGCTTGAT CCAGACGTTG CGCCGGGAAG GCGTTGCTGT AATCCCGGTG
CAGCGCAACA AGGACAAGAT CAGCCGCGCA TATGATGCTG CCGCGTTCAT CGAAAGCGGT
AACGTGCTGT TGCCCGAGTG GGCCGATTGG CTGGATGGCT TCACCAATGA GGCGGCGACC
TTCCCGAGCG GCGCGCACGA TGACCAGCTC GATCCGATGT TTGATGCGAT CCATGACGTG
CAGTTCGGCA TGACAGTTAG TGCAGCAGTG ACCCGGCCTA TCCCTAGATC GGTAACAGCG
TTCAACAAGC GTTAG
|
|---|
| Protein sequence | MLLTPDDLKA CEVELARRSL ADFARMAWPV LEPATPLKWG WALDAICEHL EAVSRGESKR
LLMNVPPGSM KSLLTGVIWP AYEWGPMDHA EMRFLGTAHK QDLAVRDNLK CRRLIQSQWY
QERWPVVLTS DQNAKTKFEN ARTGFREAMA FESMTGSRGD RVILDDPHSV DDANSAAKLA
SGVTTFREAL PSRVNNDQSA IVIVMQRLNE ADVSAVAIDL GYDHLCIPMR YEPGRSKWVY
GSGDPRKEEG ELMFPERFPE EQVSELEKTM GSYAVAGQLQ QRPAPRGGGI IKTAWFRSYR
ELPALEWRQI HADTAQKTGE ENDYSVFQCW GRTTTGQAVL IDQIRGKWEA PDLLTQARAF
WLKHKSIPGP VLRAMKVEDK VSGTGLIQTL RREGVAVIPV QRNKDKISRA YDAAAFIESG
NVLLPEWADW LDGFTNEAAT FPSGAHDDQL DPMFDAIHDV QFGMTVSAAV TRPIPRSVTA
FNKR
|
|---|
| |