Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2943 |
Symbol | |
ID | 3917378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 3160530 |
End bp | 3161354 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640445721 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_498212 |
Protein GI | 87200955 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCGGT TTACATCCTT CTTCCGGGAC CTGCCGCTTT CCGGCCGTAT CGGCCTGGGC CTGGTGCTGT TCTGGCTGGC GGTGGCGCTG GTGGGACCGG CATTGGCCCC GCATCCGGTT GGGGCATTCG TGGACTACGA CGTATTCTCC GGTTCCTCGG CTCGCTTCCC GCTGGGCAGC GATTACCTCG GTCGCGACGT GTTGAGCCGC CTGCTCTGGG GTGCGCGCTA TACCGTGTTC CTGGGGGCAG GGGCCGCCCT GCTGGCGTGT CTCGTCGGGA CCACGCTGGC GCTCACAGCC GCCGTGTGCG GTGGATGGGT GGACGAGGTG CTGTCGCGGG CGATGGACAC GCTGATCTCG ATTCCGTCCA AGATCTTCGC GTTGGTCATG GTGGCGGCAT TCGGCTCCTC CCTATTCCTG CTGCTGACCA TCACGGCGGT CACCTACGTC CCCGGAAATT TCCGCATCGC GCGTGCGCTG GCGGTCAACG TGGTCTCGTT CGATTTCGTG ACCGTGGCCC GGGCGCGGGG CGAGGGGCGG CTGCACCTTG CCCTGCGTGA AGTCTTGCCG AACATGATCC ATCCGCTGCT CGCCGATTTC GGCCTGCGCT TCGTGTTCAT CGTGCTGCTC CTGTCCGGCC TGTCGTTCCT CGGCCTTGGC GTGCAGCCAC CTCATGCGGA TCTCGGCTCG TTGGTGCGCG AAAACATGTC CGGGCTGATC GACGGGGCGC CGGCCATCAT TGTCCCGGCC ATCGCCATCG CCACGCTGAC CGTCGGCGCC AACCTGCTGA TCGATGCGCT CAAGCCCGTG GAGAAGAAGG GATGA
|
Protein sequence | MSRFTSFFRD LPLSGRIGLG LVLFWLAVAL VGPALAPHPV GAFVDYDVFS GSSARFPLGS DYLGRDVLSR LLWGARYTVF LGAGAALLAC LVGTTLALTA AVCGGWVDEV LSRAMDTLIS IPSKIFALVM VAAFGSSLFL LLTITAVTYV PGNFRIARAL AVNVVSFDFV TVARARGEGR LHLALREVLP NMIHPLLADF GLRFVFIVLL LSGLSFLGLG VQPPHADLGS LVRENMSGLI DGAPAIIVPA IAIATLTVGA NLLIDALKPV EKKG
|
| |