Gene Saro_2720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2720 
Symbol 
ID3918495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2952102 
End bp2952923 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content66% 
IMG OID640445498 
Productphage Mu protein gp30-like 
Protein accessionYP_497990 
Protein GI87200733 
COG category[S] Function unknown 
COG ID[COG2369] Uncharacterized protein, homolog of phage Mu protein gp30 
TIGRFAM ID[TIGR01641] phage putative head morphogenesis protein, SPP1 gp7 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.331056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTACG ACCTCCGCGC AATGTTCGCC CAGCGCAAGC CGCGCCGCCG TACGGTCACT 
TTCCGCGAAG TCACTCTGCC CGCGACGCTG GCCTCGGACC TCTACGCCTC AGGCTATGCG
CCCGTGGTCA AGGAATGGGA CCAGGCCGTT GGCGTGATCG TCGCCGAGTA CGACCGCAGC
CTTTCGGAAC TGACCACCGA CGCCGCGCCC GAGCTGTCCG GCGTGATCGT ATCCGTCGAT
GCTGGAATCT CGCGCTTGAT GGTGACGCTA CGCCTCAGGC TGGAGCGATG GGCCCAACGC
GTCGAGCAGG CCCAGCGGCG CAAGTGGTCG ACCAACGTGA AGCAGTCGAC CGGGCTTGAT
ATCTCGTCGA TGGTTGGCCC TGCCGATGTC CGCGCGCCGC TCGGCACGGT GATAGAGCGG
AACGTCGAGC TTGTGCGGTC CGTGTCGGAT CAGGCGCGTG CCCGCATTTC CGATACTGTG
TTTCGCGGCC TGGCGGAAAA GAAGCCGGCG CGGGCAGTTG CCGCCGAGAT CCGTGAAGCC
GTGGCGATGG GGCGGCGCCG GGCACTCAAC ATCGCGTCCG ACCAGTTGTC GAAAGCAGCT
GAGACGTTGA ACGAGGAGCG GCGCAGGCAG GCGGGCCTGA TGGCGTGGGA GTGGGTTTCG
TCGCACAAGG TCAACTATCG GCCCGAGCAT GCTGCCCGCG ACGGCAAGCG CTACAGCGAT
GATCCTGCTG ACGGTGCGCC GCCTCCACAG GACAGGCCAG GGCAGTTGCC GTTTTGTGGG
TGTACGTCGC GGGCTGTGCT AAGCTTGGAT GGGGAGTTTT AG
 
Protein sequence
MRYDLRAMFA QRKPRRRTVT FREVTLPATL ASDLYASGYA PVVKEWDQAV GVIVAEYDRS 
LSELTTDAAP ELSGVIVSVD AGISRLMVTL RLRLERWAQR VEQAQRRKWS TNVKQSTGLD
ISSMVGPADV RAPLGTVIER NVELVRSVSD QARARISDTV FRGLAEKKPA RAVAAEIREA
VAMGRRRALN IASDQLSKAA ETLNEERRRQ AGLMAWEWVS SHKVNYRPEH AARDGKRYSD
DPADGAPPPQ DRPGQLPFCG CTSRAVLSLD GEF