| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2561 |
|---|
| Symbol | |
|---|
| ID | 3916883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 2763327 |
|---|
| End bp | 2764727 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640445319 |
|---|
| Product | anion transporter |
|---|
| Protein accession | YP_497831 |
|---|
| Protein GI | 87200574 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0471] Di- and tricarboxylate transporters |
|---|
| TIGRFAM ID | [TIGR00785] anion transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.890492 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCGC GCAGGATCGG GCTGCTGGCC GGACCGCTGG GATTTGCCGC TACGCTGTTG
CTGGCCCCGC CTGCGGGCAT GCCGGACAAC GCGTGGGCCG CGGCCGGGCT GGTGTGGTGG
ATGGCTGCCT GGTGGATGAC CGAGGCGATG CCGCTTTCGG CGACCGCGCT GCTGCCGTTC
CTCGTTCTTC CGCTGACCGG CGTTGCCGAT GCGAACAAGA CCGCCGGCTC CTACTATTCG
CCGATCATGT TCCTGTTCGT GGGCGGCGCG TTTCTCGCGC TGGCCATCGA GCGCACCGGA
CTGCACCGGC GACTGGCCGT CTTCATCATG GGACTGGCGG GAACGAAGCC GAGCCAGTTG
CTGCTGGCCG TGATGGCCGC CACGGCGACG CTTTCCAGCT TCATCTCGAA CACTTCGACG
GCTCTCATCA TGATGCCGAT GGCGCTGGCC ATGCTGGCGG CAGGCGGAGT GCGCGAAGGC
GAGACGCGCG GCATGGCGGG CGCCCTGCCG ATGGGCATTG CATTTGCCGC GAGCATCGGC
GGGCTGGCGA CGCTGATCGG CACGCCGACC AACGCGATTG CTGCCGGCCT CATCGAGAAG
TCGCTCGGCA CCGAGATCAC CTTCCTGCGC TGGGCGATGT ACGGCGTACC CATCGTGCTC
ATCGCCGTGC CCCTGGCCGC GTGGATCATC GCCCGGGTGC AGAAGCTTGA CGAAGACAGC
TTCGACCCCC TCGCCGCGCG AGAGGCCATC GGAAGCGCAA CGGCATGGAC GACGCCGGAA
AGACGCCTTG TCCCGGTCGC CCTGCTGGCC TTTCTCGCCT GGGTGGCGCA GCCCTGGCTC
GAAGGCCTGT TCCCCAAGGG GGGCCTGACC GACGGGACCA TCGCCGCCGC AGCAGGCCTC
GTGCTGTTCT TCCTGCCTGA CGGCACCGGG CGCCCCATGC TGACCTGGCC CGAGGCGAAC
CGGGCACCGT GGGACGTCGT GCTGATGTTC GGCGGCGGGC TGGCAATGGC GATGGGCATG
ACCGAATCCG GCCTGACGAA ATGGATGGGC GAAATGCTGC TGCCGCTTGC CGGCGTACCG
CTTCCGGTCG TGGCGCTCGT CCTGGTGGCA TTCGTCATTC TCGTGACGGA ATTTGCCAGC
AACATCGCCG CTGCCAGCGG GATCATGCCC GTGGTGGCGG CGCTCGTCGC CGCACTGGGG
GCCGATCCGA TCATGCTCGC GCTGCCGGCG GCATTCGCGG CGACATGGGG ATTCATGCTG
CCAGCCGGCA CCGGACCCAA CGCCCTGGCA TGGGCAACGG GGCACTGTTC GATGCGGTCG
ATGATAAAGG CCGGGTTCGC GCTGGACGTG GCCGGCGTGT TCCTGCTGGT CGGGGTGGTC
TGGACGGTTA CTTCTCTCTG A
|
|---|
| Protein sequence | MDARRIGLLA GPLGFAATLL LAPPAGMPDN AWAAAGLVWW MAAWWMTEAM PLSATALLPF
LVLPLTGVAD ANKTAGSYYS PIMFLFVGGA FLALAIERTG LHRRLAVFIM GLAGTKPSQL
LLAVMAATAT LSSFISNTST ALIMMPMALA MLAAGGVREG ETRGMAGALP MGIAFAASIG
GLATLIGTPT NAIAAGLIEK SLGTEITFLR WAMYGVPIVL IAVPLAAWII ARVQKLDEDS
FDPLAAREAI GSATAWTTPE RRLVPVALLA FLAWVAQPWL EGLFPKGGLT DGTIAAAAGL
VLFFLPDGTG RPMLTWPEAN RAPWDVVLMF GGGLAMAMGM TESGLTKWMG EMLLPLAGVP
LPVVALVLVA FVILVTEFAS NIAAASGIMP VVAALVAALG ADPIMLALPA AFAATWGFML
PAGTGPNALA WATGHCSMRS MIKAGFALDV AGVFLLVGVV WTVTSL
|
|---|
| |