Gene Saro_2380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2380 
Symbol 
ID3915725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2532877 
End bp2533800 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content65% 
IMG OID640445135 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 
Protein accessionYP_497650 
Protein GI87200393 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.724559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCCG TCGCGGCGCC GCTGGTCGAA AGCCGCCTGC CGGATTGGAT CGAACCCCGT 
TTCTTCCGGT CGGTCGAGGA GCTGTTCCAA CTGGCGCCCG AGGCAGAGAT CGGCTGGTTC
GATCTCAACG ACAAGGAGCC GATGGCCAAG GCCATCCGCA GCGCCACCAA GCTGAAGTGG
CTCAACTCTA TCTATGCGGG TGTCGACGCC ATGCCGCTTG ATCTCTTGCG CGAGCGCGGC
GTCGTTCTCA CAAACGGCGT CGGCATCAAC GCGATCACCA TCGCCGAATA TGTGGTCATG
GGTATGCTTA CGGTCGCGAA GGGTTATCGC GAGGTGGTTC GCGCGCAGGA ACGGCATGAG
TGGCTGATGG ATTCGCCCGG CAAGGTCGAG CTTCACGGCT CGCGCGCGCT TGTTCTCGGT
TACGGCGCGA TCGGGCAGCG GGTCGAAAGG ATGCTTCAGG CCTTCGACGT CGACGTGGCG
AAGGTCAGGC GCTCCGGAGG GGCCGGCGCT CTGGGCCCCG ACGAATGGCG CTCACAGCTT
GGCACATTCG ACTGGGTCAT CCTTGCCGTT CCGGCGACGG CCGAGACAGA AGGCATGATC
GGCGCCGCCG AACTGGCGGC AATGAAGCCG ACCGCGACCC TCATCAACGT CGCCCGCGGC
ACCGTGGTCG ATCAGGAGGC ACTGGTCGTC GCGCTCTCGG CGGGGCGCCC GGGTCAAGCA
TTCCTCGATG TCACCTCGCC GGAGCCGCTG CCGGCGGATC ATCCGCTGTG GTCCTTGCCG
AACGCGCACG TGACGATGCA TCTGTCGGGG CGGGCGCAGA CGCGGATGTT CGAGCGGTCT
GTAGCGCGGT TCCTCGAAAA TCTCGCGCGG TTCCGGCGCG GAGAGCCGCT CGAGCCGCAA
GTCGACCTTG CGCTGGGATA TTGA
 
Protein sequence
MNAVAAPLVE SRLPDWIEPR FFRSVEELFQ LAPEAEIGWF DLNDKEPMAK AIRSATKLKW 
LNSIYAGVDA MPLDLLRERG VVLTNGVGIN AITIAEYVVM GMLTVAKGYR EVVRAQERHE
WLMDSPGKVE LHGSRALVLG YGAIGQRVER MLQAFDVDVA KVRRSGGAGA LGPDEWRSQL
GTFDWVILAV PATAETEGMI GAAELAAMKP TATLINVARG TVVDQEALVV ALSAGRPGQA
FLDVTSPEPL PADHPLWSLP NAHVTMHLSG RAQTRMFERS VARFLENLAR FRRGEPLEPQ
VDLALGY