Gene Saro_2348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2348 
Symbol 
ID3915693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2493944 
End bp2495143 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content68% 
IMG OID640445104 
Productpeptidase M20D, amidohydrolase 
Protein accessionYP_497619 
Protein GI87200362 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCCAGC AAGAACTGCT CGAACAGGCG CGCGGATTTT CCGACGCCAT CGTCGCGTTG 
CGACGCGCGA TCCATGCCGA ACCCGAACTC GGCCTGCACA CCCCCCGCAC GCGCGACAAG
GTGCGCAACG CGCTTGCCCA CCTGCCGCTC GAATGGCGCG AGGGGCCGTC GACCACGGGG
CTCGTTGCCA CGCTCAAGGG CCGGGCTGGG CCGGGTCGCC GCGTCCTCCT GCGCGGCGAC
ATGGACGCCC TGCCGATGAC AGAGGAAACC GGGTTGCCGT TTTCCTCGAC CATCCCCGGC
GCGATGCATG CCTGCGGGCA CGATACCCAC ACCGCCATGC TGGCGGGCGC CGCCGAACTT
CTTTGCGCGC GGGCAGACCG GATCGCGGGC GAGGTCCAGT TCATGTTCCA GCCGGGAGAG
GAAGGCTTCC ACGGCGCGCG TTTCATGCTC GAGGACGGGT TGATCGATCC GCTGCCGGAT
GCCGCGTTTG CGCTGCACGT CATGCCCAAC AGCCCGCACG GCCTCGTTGC TGGGCGCGCC
GGGCCGCTGC TCGCCTCGGC AGACCAGTTC GACATCGTGG TGCAGGGGCG GGGCGGCCAC
GCCTCGATGC CGCACGATGC TCTCGACCCG GTGCCAGTCG CCTGCGAGAT CGTGACGGCG
CTTCAGGCGG TCGTCACCCG CAAGTTCCCC GTCTCCGACC CGGTCGTCGC CACCGTGGCC
AGGATTGAGG CGGGCACCGC GCACAACGTC ATTGCCGATC GCGTCGCCAT GCGCGGCACG
CTGCGCACGC TTTCCGCCAC CAATCGCGCC CGCCTCCACG AAGCGCTGAC CCGCGTCGCC
ACCAACATCG CCGCCGCCCA CGGGCTGAGC GCCGATGTCG CGATCACTCC CGGTTTTCCG
GTCACCGTCT GCGATGCCCG CGCGGTCGAT CTTGGCGAGA AGGTCGTCCA GGATCTCACC
GGAGAGCGTG GCTTCCATCG CCTCGACAGC CCGATCATGG GGGCCGAGGA TTTCTCTTAC
GTCCTTGAAA AGGTGCCAGG CGCGATGTTC TTCCTCGGGG TGGCCCACGA GGGCGTCGAC
TGGCGCTCCT GCTGCTCCAT CCATTCGACC CGCATGATGG TCGATGAAAG CGTGCTGCCG
CTTGGCACTG CAGTCCTTGC GGGTTGCGCC GAACGCTTCC TTGCCGAGGG TTTCGCATGA
 
Protein sequence
MLQQELLEQA RGFSDAIVAL RRAIHAEPEL GLHTPRTRDK VRNALAHLPL EWREGPSTTG 
LVATLKGRAG PGRRVLLRGD MDALPMTEET GLPFSSTIPG AMHACGHDTH TAMLAGAAEL
LCARADRIAG EVQFMFQPGE EGFHGARFML EDGLIDPLPD AAFALHVMPN SPHGLVAGRA
GPLLASADQF DIVVQGRGGH ASMPHDALDP VPVACEIVTA LQAVVTRKFP VSDPVVATVA
RIEAGTAHNV IADRVAMRGT LRTLSATNRA RLHEALTRVA TNIAAAHGLS ADVAITPGFP
VTVCDARAVD LGEKVVQDLT GERGFHRLDS PIMGAEDFSY VLEKVPGAMF FLGVAHEGVD
WRSCCSIHST RMMVDESVLP LGTAVLAGCA ERFLAEGFA