Gene Saro_2289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2289 
Symbol 
ID3916607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2431053 
End bp2433122 
Gene Length2070 bp 
Protein Length689 aa 
Translation table11 
GC content63% 
IMG OID640445045 
ProductNADH dehydrogenase subunit L 
Protein accessionYP_497560 
Protein GI87200303 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 
TIGRFAM ID[TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCCA TCCTGATCAT CGTATTCCTG CCGCTTCTGG CAGCGATCAT CGCCGGGCTC 
GGCAACAAGA AGCTGGGCGC CGTTCCGGCC AAGGTCGTGA CGACCGGCGC GCTGTTCATC
TCGTGCGCGC TGTCGTGGCC GATCTTCCTC TCGTTCCTCG GCGGTCACGC CGAGGCGAGC
GTGACGCCGG TCCTGCACTG GGTCACCTCG GGCGATCTCG ATTTCTCGTG GGCCCTGCGC
GTCGACACGC TGACCGCGGT CATGCTGGTG GTCATCACCA GCGTCTCGGC GCTCGTGCAC
CTCTATTCTT GGGGTTACAT GAGCGAGGAG CCGGACCAGC CGCGCTTCTT CGCGTATCTC
TCGCTCTTCA CCTTCGCCAT GCTCATGCTG GTGACGGCCG ACAACCTCGT GCAGATGTTC
TTCGGCTGGG AAGGCGTTGG CCTTGCCTCG TACCTGCTGA TCGGCTTCTG GTTCCGCAAG
CCCAGCGCCA ACGCCGCCGC GATGAAGGCT TTCGTGGTCA ACCGCGTGGG CGACCTCGGC
TTCATGATGG GCATCTTCGG GACGTTCCTG GTGTTCGGCA CCGTTTCGAT CCCTGCTATC
CTTGAAGCGG CGCCCGGCAT GGCCGGTTCC ACCATCGGCT TCCTCGGTCA CCGCTTCGAC
ACGATGACCG TGCTGTGCCT GCTGCTGTTC ATCGGCGCGA TGGGCAAGTC GGCGCAGCTT
GGCCTGCACA CCTGGCTTCC CGACGCGATG GAAGGCCCGA CCCCGGTTTC GGCGCTGATC
CACGCGGCGA CAATGGTCAC CGCGGGCGTG TTCATGGTTT GCCGTCTCTC GCCGATGTTC
GAAGTCAGCC CCACGGCGCT GTCGTTCGTG ACCTTCATCG GCGCGATGAC CTGCATTTTC
GCCGCGACCG TCGGCACGAC GCAGACCGAC ATCAAGCGCG TGATCGCCTA TTCGACCTGT
TCGCAGCTCG GCTACATGTT CTTCGCCGCC GGTGTCTCGG CTTATGGCGC GGCGATGTTC
CATCTGTTCA CCCACGCCTT CTTCAAGGCG CTGCTGTTCC TTGGCGCGGG GTCGGTCATC
CACGCGATGC ACCATGAACA GGACATGCGG TACTACGGCG GCCTGCGTAA GCAGATCCCG
CTGACCTACT GGGCGATGAT GATGGGCACG CTGGCGATCA CCGGCGTCGG CATCGTCGAC
CTGTTCGGCT TTGCAGGGTT CTACTCGAAG GATGCGATCC TCGAGGCGGC CTATGCCAAG
GGTACCGAGC TTGGGCACTT CGCCTTCTTC ATCGGCATCT TCGCTGCCCT GCTGACCAGC
TTCTATTCGT GGCGCCTGGT GTTCCTCACC TTCTTCGGCA AGCCGCGCTG GGAGCAGTCG
GAACACATCC AGCATGCGGT CCACGATGCG CATGGGCATG ACGATCACGC ACACGGCCAC
GCACACGGGC ACGCGCACGG CCACGACGAC CACGCGCATG GACATCATGA CGAGCATGGC
GACGGCACGG CGGGCTACCA TCCGCACGAG AGCCCGCTCA ACATGCTGGT TCCGCTCGGC
GTCCTTTCGC TCGGCGCGGT CTTTGCCGGC TTCGTGTTCC ACCACGCGTT CGTCAGCGAA
GGCACCGGCC ACTTCTGGAA GGGCTCGCTG GTGTTCAGCG AACACCTGAT CCACGCGATG
CACGAAGTGC CGACGTGGGT GAAGTGGGCG CCGTTCGCGG TCATGGCCAC CGGCCTGCTG
ATCGCCTGGT ATGCCTACAT CAAGAACACG AAGTTCCCGG CGGCTTTCGT CGAGCAGTTC
GCGTTCCTCT ACAAGTTCCT GCTCAACAAG TGGTACTTCG ACGAGCTTTA TCACTACATC
TTCGTGGTGC CCGCCATGTG GCTTGGCCGG GTGTTCTGGA AGGTGGGTGA CCAGGGCATC
ATCGACCGCT TCGGCCCGAA CGGTGCCGCA TGGGTCGTCG CCCAGGGCAG CCGCGCCGCC
GCCAAGCTCC AGTCGGGGTA TCTCTATAGC TATGCGCTGG TCATGCTCGT CGGACTTGTC
GGCGCGATCA GCTGGGTGAT CGCACAATGA
 
Protein sequence
MSSILIIVFL PLLAAIIAGL GNKKLGAVPA KVVTTGALFI SCALSWPIFL SFLGGHAEAS 
VTPVLHWVTS GDLDFSWALR VDTLTAVMLV VITSVSALVH LYSWGYMSEE PDQPRFFAYL
SLFTFAMLML VTADNLVQMF FGWEGVGLAS YLLIGFWFRK PSANAAAMKA FVVNRVGDLG
FMMGIFGTFL VFGTVSIPAI LEAAPGMAGS TIGFLGHRFD TMTVLCLLLF IGAMGKSAQL
GLHTWLPDAM EGPTPVSALI HAATMVTAGV FMVCRLSPMF EVSPTALSFV TFIGAMTCIF
AATVGTTQTD IKRVIAYSTC SQLGYMFFAA GVSAYGAAMF HLFTHAFFKA LLFLGAGSVI
HAMHHEQDMR YYGGLRKQIP LTYWAMMMGT LAITGVGIVD LFGFAGFYSK DAILEAAYAK
GTELGHFAFF IGIFAALLTS FYSWRLVFLT FFGKPRWEQS EHIQHAVHDA HGHDDHAHGH
AHGHAHGHDD HAHGHHDEHG DGTAGYHPHE SPLNMLVPLG VLSLGAVFAG FVFHHAFVSE
GTGHFWKGSL VFSEHLIHAM HEVPTWVKWA PFAVMATGLL IAWYAYIKNT KFPAAFVEQF
AFLYKFLLNK WYFDELYHYI FVVPAMWLGR VFWKVGDQGI IDRFGPNGAA WVVAQGSRAA
AKLQSGYLYS YALVMLVGLV GAISWVIAQ