Gene Saro_2198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2198 
Symbol 
ID3918864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2337477 
End bp2339465 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content64% 
IMG OID640444953 
ProductParB family protein 
Protein accessionYP_497470 
Protein GI87200213 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0776578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAGT CGATCCCGCT GAACAAGCTC GTCCAGTCTC CCCGCAATGT CCGCCGTCAC 
ACTGACCCGG CAGCAGATGC TGAACTTAAG GCCAGCATCG CTGCCCATGG GCTGCTGCAG
AATCTCATTG TCCGGCCTGC CGCGAAGGGC AAATTCGAGG TCGAAGCCGG CGAGCGCCGC
CGCCGCGTAA TGCTGGCGCT CACGGATGAA AAGATCCTCG CGCGTGATCA CGAAGTCACG
TGCCTCGTGC TCGCGGACAG CGCTGAAGCG GCCGTCGAGA CCAGCCTCGC GGAAAACTTC
CACCGCCTCG CCATGAACCC GGCCGACGAA GCCCAGGCCT TTGCGGCGCT CGTGGCAGGC
GGTGCGACCG TCGAGGACGT TGCTCGCCGC TTCGGTCTGA CCATTCGCTT CGTTGATGGC
CGGCTGCGTC TCGCGAACCT TGCGCCTGTG GTGTTTGAGG CACTGGCATC CGGGGAAATC
ACCCTCGATA TCGCCAAGGC CTTCGGCGCG ACCTCGGACC AGGACATCCA GGCCCGTGTC
TTCGAGCAGG TTTCCTCGGC CTACTACGCA CCCAATCCTG ACAGCATCCG GCGCATGGTC
CTCTCGGGCA CTGTCCGGGG CAGCGATCCG CGCGCCCGTC TCGTTGGCCG CGATGCCTAC
ATTGCCGCGG GCGGCCGGAT CGAGCGTGAA CTGTTCGACA ACGACGACAG CGAATCCTGG
GTCGATTTTG CGCTGCTCGA AAGCCTTGCC GCCGCGAAGA TGGAAGAGCA GGCCAAAGCT
CTCGCCGCCG AGCAGGGTCT TGCCTGGGTC AAGCCGACGC TCGATCCCTA TGCCAGCCAC
GATCTGGTCG AAGGGCTGGT CCGGCTTCCT GCCGAACAGG CGCCATTGAC CGACGCAGAA
TTGGCGAGGC TCGACGAACT CGATGCCTCC TATGACGAGC ATGCGGCGAT CCTCGAGGAT
GAGGACAGTG CCGAGGAGGC GGTGGCAGCC GCCGAAGCGG CGATCGAGGC GATAGAACGC
GAATGCCAGG AAATCCGAGC TCGCCCGCCC GTCATCGCAG CTGACCTCAA GGCCGAAGCA
GGTATGATCC TGGTGCTATC GCGCGATGGC ACGCCGGTTC TCCAGCCGGT GTTCTATGGC
GAGCGTCAGG CTGAACCCGC AGAACCCGAT GACGGGATCG AAGTCGTTGC AGGCGAAGAA
GGTTCGGACA GGCGTCGGAC CACCTTGTCG AAACGTCTGG TTGACGAACT TGCGATGCAG
CGCCGCGATG TTCTGGCACT TCACGTTGCA TCCGATCCCG GGCTGGCGCT CGACATCATG
ATCTCCACCC TCGCCGATGC CGATACCCAC GATTGGTGGG CGCGCCCTTC GACCACGCTA
CGCGCGCCAG TTCCGGCAGG CCCGATCATC GGCTTCGAAG CCAAGGATGC GCCGGCGAGC
AGCGCGCTTG CTGAGTTCAG ATCCGGCCTC GACGAAAGCT GGCGTGCCGG TTCCGAAGCG
ACGTCCCGCT TCGATCTCTT CCGTGCGCTG CCCGATGACA GCCGCGCGGC CTGGCTGGGC
TATGTCGTCG CCCGTTCGCT CGAGGCAAGC CTCAACATGG CGGGAGAGCG TCAGCTGCCG
TTCCAGGACC ATCTCGGCAG CCTGATCGGT ATCGACATGG CGCAGTGGTG GCGACCGACA
GCAGCCAACT ACTTCGACCG GGTATCGAAG CAGGTGATCC TCGACGCGCT GACCGATGTC
GGCGGCATCG AGCTCTCCTC GCGCTTTGCC TCGGTCAAAA AAGGTGATCT CGCGATGAGC
GCCGAGCGCG TCTTCGCCGG CACCTACATC ACCGAGGTCG AGGTCCGCGA AAAGGCCCTG
GCCTGGGTGC CTGAGGTCAT GCGGTTTGCC TCCGCTGCCC CGGAGGCTGG CGAAGCCGAG
ATCGACGCAA GCGACGCTGA GCCTGGTGTC GACGGCGAAA CTCATACCCC CCACGAGCTG
GCCGCCTGA
 
Protein sequence
MIKSIPLNKL VQSPRNVRRH TDPAADAELK ASIAAHGLLQ NLIVRPAAKG KFEVEAGERR 
RRVMLALTDE KILARDHEVT CLVLADSAEA AVETSLAENF HRLAMNPADE AQAFAALVAG
GATVEDVARR FGLTIRFVDG RLRLANLAPV VFEALASGEI TLDIAKAFGA TSDQDIQARV
FEQVSSAYYA PNPDSIRRMV LSGTVRGSDP RARLVGRDAY IAAGGRIERE LFDNDDSESW
VDFALLESLA AAKMEEQAKA LAAEQGLAWV KPTLDPYASH DLVEGLVRLP AEQAPLTDAE
LARLDELDAS YDEHAAILED EDSAEEAVAA AEAAIEAIER ECQEIRARPP VIAADLKAEA
GMILVLSRDG TPVLQPVFYG ERQAEPAEPD DGIEVVAGEE GSDRRRTTLS KRLVDELAMQ
RRDVLALHVA SDPGLALDIM ISTLADADTH DWWARPSTTL RAPVPAGPII GFEAKDAPAS
SALAEFRSGL DESWRAGSEA TSRFDLFRAL PDDSRAAWLG YVVARSLEAS LNMAGERQLP
FQDHLGSLIG IDMAQWWRPT AANYFDRVSK QVILDALTDV GGIELSSRFA SVKKGDLAMS
AERVFAGTYI TEVEVREKAL AWVPEVMRFA SAAPEAGEAE IDASDAEPGV DGETHTPHEL
AA