Gene Saro_2158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2158 
Symbol 
ID3918823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2296431 
End bp2297189 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content64% 
IMG OID640444913 
Producthypothetical protein 
Protein accessionYP_497431 
Protein GI87200174 
COG category 
COG ID 
TIGRFAM ID[TIGR02756] type-F conjugative transfer system secretin TraK 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTACC GATCGGCGGC CCACGCACGG GTCCTACTTC TGAGCGCGGC GGCGCTGCTC 
GCCGTAGCAG CTGAGGCTGC CCATGCGGCC GACCAGTTCA AACAGGCCGC CGATGGCGCC
GGAATCGAGT GCATCGTTTC AGCGCGAGAG CTGACCCGCT TCGCATTGGT CGACGACCAG
TTCGCCAGCG TCTCGAAGAT CTCGACCGGG ACGCCCTACA ACGACTTTGC AGTGACCAAC
GAGCCTGTGC GCGGCGACAT CTATGTGTCG GTGCCGGAAA CTTACGCGGC ACGGTCGATC
AGCTTCTTCA CCACCACGAA AAAGGGCTTC GTCTACAAGG TCGCGTGCCG GGTTGAGCAA
ATTCCGGCGA CCCAGGTCTT CATCACCAAC CCCGCCATCG CGAAGAACCG GGCGGCGGAT
TGGGAAAGCC AGACCCCGAT CGAGACCAGC GCCGTCAGGC TCATCCAGGC GATGGCCAAT
GACCGGACGG TCGACGGTTT CGAGGTCCGC CAATCGACTG CCATACCCGC ACGGGTCGGC
GATCTCGAAG TCCAGCTCAT CGCTGATTAT CGCGGCGCCA GCCTCACTGG GAAGGTCGTC
CGCATCCACA ATCGCGGAGC GAAAAGCGTG ACGCTCGCCG AACGCGATCT CGCACCGCGC
GACACGCTCG CCGTCTCGAT CGCCGAGCCA AAGCTCGAAC CCGGGGCCAG CACCACGGCC
TTTGTTGTCG GCGCAAGCGG GGAGACCGGC AATGACTGA
 
Protein sequence
MAYRSAAHAR VLLLSAAALL AVAAEAAHAA DQFKQAADGA GIECIVSARE LTRFALVDDQ 
FASVSKISTG TPYNDFAVTN EPVRGDIYVS VPETYAARSI SFFTTTKKGF VYKVACRVEQ
IPATQVFITN PAIAKNRAAD WESQTPIETS AVRLIQAMAN DRTVDGFEVR QSTAIPARVG
DLEVQLIADY RGASLTGKVV RIHNRGAKSV TLAERDLAPR DTLAVSIAEP KLEPGASTTA
FVVGASGETG ND