Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2158 |
Symbol | |
ID | 3918823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 2296431 |
End bp | 2297189 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640444913 |
Product | hypothetical protein |
Protein accession | YP_497431 |
Protein GI | 87200174 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02756] type-F conjugative transfer system secretin TraK |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTACC GATCGGCGGC CCACGCACGG GTCCTACTTC TGAGCGCGGC GGCGCTGCTC GCCGTAGCAG CTGAGGCTGC CCATGCGGCC GACCAGTTCA AACAGGCCGC CGATGGCGCC GGAATCGAGT GCATCGTTTC AGCGCGAGAG CTGACCCGCT TCGCATTGGT CGACGACCAG TTCGCCAGCG TCTCGAAGAT CTCGACCGGG ACGCCCTACA ACGACTTTGC AGTGACCAAC GAGCCTGTGC GCGGCGACAT CTATGTGTCG GTGCCGGAAA CTTACGCGGC ACGGTCGATC AGCTTCTTCA CCACCACGAA AAAGGGCTTC GTCTACAAGG TCGCGTGCCG GGTTGAGCAA ATTCCGGCGA CCCAGGTCTT CATCACCAAC CCCGCCATCG CGAAGAACCG GGCGGCGGAT TGGGAAAGCC AGACCCCGAT CGAGACCAGC GCCGTCAGGC TCATCCAGGC GATGGCCAAT GACCGGACGG TCGACGGTTT CGAGGTCCGC CAATCGACTG CCATACCCGC ACGGGTCGGC GATCTCGAAG TCCAGCTCAT CGCTGATTAT CGCGGCGCCA GCCTCACTGG GAAGGTCGTC CGCATCCACA ATCGCGGAGC GAAAAGCGTG ACGCTCGCCG AACGCGATCT CGCACCGCGC GACACGCTCG CCGTCTCGAT CGCCGAGCCA AAGCTCGAAC CCGGGGCCAG CACCACGGCC TTTGTTGTCG GCGCAAGCGG GGAGACCGGC AATGACTGA
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Protein sequence | MAYRSAAHAR VLLLSAAALL AVAAEAAHAA DQFKQAADGA GIECIVSARE LTRFALVDDQ FASVSKISTG TPYNDFAVTN EPVRGDIYVS VPETYAARSI SFFTTTKKGF VYKVACRVEQ IPATQVFITN PAIAKNRAAD WESQTPIETS AVRLIQAMAN DRTVDGFEVR QSTAIPARVG DLEVQLIADY RGASLTGKVV RIHNRGAKSV TLAERDLAPR DTLAVSIAEP KLEPGASTTA FVVGASGETG ND
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