Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2043 |
Symbol | panB |
ID | 3917690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 2181011 |
End bp | 2181880 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640444795 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_497316 |
Protein GI | 87200059 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCACGA CCTTCCAGCT CGATACCTCG ACAAGCCGTG CCAACCCCAC CCCGGCACCG ATGAAGCGCC TGACGATCCC CGCGATCCGC CAGCGCAAGA AGGACGGCGT GACGGCACAA CCGGTCGTGA TGCTCACCGC CTATACCGCC CGTCAGGCGC AATTGCTCGA CGCCCATTGC GATCTGCTGC TGGTCGGGGA TTCCCTTGGC CAGGTGATCT ATGGCCTGCC TTCCAGCGTT CCGGTCACGC TCGACATGAT GGCAGCCCAT GGCGCGGCGG TCGTGCGTGG ATCGTATCAC GCGGCGGTCG TGGTCGACAT GCCGTTCGGC AGCTACGAAG CATCGCCGCA GCAGGCCTTC GAAAGCGCCT CGCGGCTGCT GAAGGAAACC GGTTGCGCGG CAGTGAAGCT CGAAGGGGGC GAGGCCATGG CCGAAACGGT CGCGTTCCTC ACCAACCGGG GCATCCCGGT CATGGGCCAC GTCGGCCTCA CCCCGCAGGC GGTCAATGTG CTGGGCGGCT ACAACGCGCG CGGCCGCAGC GAGGCCGAAG CGGCCAAGAT CGTCGGAGAC GCACGGTCGC TTGCCGATGC CGGTGCCTTC GCCATCGTGA TCGAAGGCGT GGTCGAGCCC ATCGCGATTG CCATCACCCA GGCCGTGGCG TGCCCGACAA TCGGCATCGG CGCCTCGGCT CAATGCGACG GGCAGGTTCT GGTCACCGAA GACATGCTCG GCATGTTCGA GCGCGTTCCG CGGTTCGTGA AGATCTACGA GGATCTCGCC GGGACCATCT CCGGGGCTGC GGCGCGTTAT GCCGACGAAG TGCGCGCGCG CACCTTCCCC GGTATTGAAC AGACGTACCA GCCCAAGTAA
|
Protein sequence | MSTTFQLDTS TSRANPTPAP MKRLTIPAIR QRKKDGVTAQ PVVMLTAYTA RQAQLLDAHC DLLLVGDSLG QVIYGLPSSV PVTLDMMAAH GAAVVRGSYH AAVVVDMPFG SYEASPQQAF ESASRLLKET GCAAVKLEGG EAMAETVAFL TNRGIPVMGH VGLTPQAVNV LGGYNARGRS EAEAAKIVGD ARSLADAGAF AIVIEGVVEP IAIAITQAVA CPTIGIGASA QCDGQVLVTE DMLGMFERVP RFVKIYEDLA GTISGAAARY ADEVRARTFP GIEQTYQPK
|
| |