Gene Saro_2042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2042 
Symbol 
ID3917689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2179236 
End bp2180813 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content64% 
IMG OID640444794 
Productphospholipid binding protein 
Protein accessionYP_497315 
Protein GI87200058 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGGTC GCGTCAAACC GCTCGACGCC ATTCTTGCAA CTGCAGAAAA GAAATCGTTG 
CACCGCTCGC TGGGTCCGGT CCAGCTCACT CTTCTCGGTG TCGGTGCCAT TATCGGTACC
GGCATTTTCG TGCTTACGGC CGCCGCCGCG CAAAAGGCCG GGCCGGGCAT GATGTGGAGC
TTCGTGATCG CGGGCTTCGT CTGCGCGGTT GCGGCTCTGT GCTATTCCGA GCTGGCCTCG
ATGGTCCCGG TCTCGGGTTC GGCCTATACC TACAGCTATG CCGTGGTCGG CGAAATGCTG
GCCTGGATGG TCGGCTGGGC ACTGATCCTC GAATATGCCG TGGCCGCGTC CGCCGTGTCG
GTCGGGTGGT CCGGCTATTT CATGGGACTT CTCAAGAGTT TGACCGGGTT TGAATTACCG
GCGATGCTAC AAGCTGGGCC AACCTGGACG ATGAACGGCC TGCTGCCCCA CGCTGATTTC
TCCACTGGCC TGATCAACGT GCCCGCAATC GTCGTGGCAC TGCTCGTCAC CTGGCTGCTC
ATGCTCGGCA CCAAGGAAAG CGCCACGTTC AACGCGATCC TCGTGGCGAT CAAGGTCGCG
GCGCTGACCA TGTTCATCGT GCTGACCCTG CCGGCGATCG AGCGCGAGCA CTTCGCCCCA
TTCGCCCCCA ACGGCTGGTT CGGCCCTGCC GGAACGACCG GGATGGGCAT CGTCGGCGCG
GCGTCGTCGA TCTTCTTTGC CTACGTCGGC TTCGACGCGG TCTCGACCGC TGCCGAAGAA
ACCAAGAACC CGCAGCGCAA CGTGCCGATC GGCCTGATCG GAAGCCTTGC GATCTGCACC
GTGTTCTACC TGCTGGTCGC CGCTGGCGCG ATTGGTTCGA TCGGTGCGCA GCCGACCGCT
CTGGGCGTCG CGCCGGGTTC GGCCGAGTTC ACCCAGCAGT GCGCCGCGCT GCTTGCTTCG
GGCCAGGAAC CGCTGGTCTG CTCGAACGAG GCTCTGGCCC ATGTCCTGCG CGCCATCAAC
TACACCTATG CTGGCGACCT GATCGGCCTT GCGGCCAACC TCGCGCTGCC GTCGGTCATC
CTGATGATGC TCTACGGCCA GACGCGCATC TTCTTCGTCA TGGCGCGCGA TGGCCTGCTT
CCGGAGAAAC TGGCCACCGT CCACCCCAAG TGGAAAACGC CTCACATCGT GACCGCAATG
ACCGGCGTAT TCGTCGCCAT CGCGGCGGCG CTGCTTCCGG TTGGTCAGCT TGCCGACATC
TCAAATTCGG GCACGCTCTT CGCGTTCTTC ATGGTCGCGA TCGCGGTCAT GCTGCTCCGC
GCCCGCGACC CGAACCGCGT CCGTCCGTTC CGCACACCGG CGGTGTGGGT CGTCGGCCCG
ATCGCCGCGA TTGGCTGTAT CTTCCTCTAC TGGAACCTGC CGTTCGAGGC GAAGATGGTC
CTTCCCGTCT GGGGCGCCAT CGGGCTCGTG TTCTACTTCG CCTACGGCTA TCGCAAGAGC
CACGTCGGCC AGGGCCACGT CGAAGTCCAC GAGGGTGACG CCGACGTCCC GCCGATGCCG
GTCCCGCCGA TCGACTGA
 
Protein sequence
MFGRVKPLDA ILATAEKKSL HRSLGPVQLT LLGVGAIIGT GIFVLTAAAA QKAGPGMMWS 
FVIAGFVCAV AALCYSELAS MVPVSGSAYT YSYAVVGEML AWMVGWALIL EYAVAASAVS
VGWSGYFMGL LKSLTGFELP AMLQAGPTWT MNGLLPHADF STGLINVPAI VVALLVTWLL
MLGTKESATF NAILVAIKVA ALTMFIVLTL PAIEREHFAP FAPNGWFGPA GTTGMGIVGA
ASSIFFAYVG FDAVSTAAEE TKNPQRNVPI GLIGSLAICT VFYLLVAAGA IGSIGAQPTA
LGVAPGSAEF TQQCAALLAS GQEPLVCSNE ALAHVLRAIN YTYAGDLIGL AANLALPSVI
LMMLYGQTRI FFVMARDGLL PEKLATVHPK WKTPHIVTAM TGVFVAIAAA LLPVGQLADI
SNSGTLFAFF MVAIAVMLLR ARDPNRVRPF RTPAVWVVGP IAAIGCIFLY WNLPFEAKMV
LPVWGAIGLV FYFAYGYRKS HVGQGHVEVH EGDADVPPMP VPPID