Gene Saro_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_2009 
Symbol 
ID3917329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2143262 
End bp2144029 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content64% 
IMG OID640444760 
Producthypothetical protein 
Protein accessionYP_497282 
Protein GI87200025 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.271087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTTTT CCGCTGAACT CCTTGCGTCG GTACGCTCCG GCCTTCGTGC GGTTCCACCG 
CTCCACAAGG CCGTCCGGTC GATCAGGGAT CTTGCCGATC CGGACCGCCG GGCAATGCGC
CGGATGCTCC GCCGTCACGC GGGGCACGTC CTGCAACCCT ACCCCACCAC CTTCGAAGAC
CGTTACCCGG AAGTGTTCAC GGCGCTCAGC GCGCTCCTGT GGGACGTTCC GGAACCTGCG
ATCCTTTCGT TCGGCTGTTC CGACGGAAGC GAGGTCCGCA GCCTTCGCCG CTGGTTTCCA
CGGGCACGCA TCATCGGTCT GGACCCCAAT CCCCGGATGA TCCGCGAGGC GCGTGCACAT
CTCGCGCTCA ACCCCGATCG CGGCATCTCC TACATCGAGG CCAATTCGAC CGACGCCCTG
GGCGACATGC AGTTCGATGC CATTCTCGCT ATGGCCGTGT TCCGCCACGG CCGGCTTGAA
ACCGAAGCGC CTGACCGGTG CGACGAAGTC CTGCCCTTTG CGCAGTTCGA CAAGGAAGTG
ACGGCGATGC ATCGCCATCT GCGGCCGGGC GGATGGCTCT CGGTCTGGAA TGGCCACTTC
CGCTTTCGCG ACACGACCAT TGCCCCCCAC TATCAGGCCC GAACCCTGAC CTTTACCCGC
GAAGTGCCGC TCACCCTGCT GTACGGGCGC GACAACCGCA GGATCGATGA CGAGCCCTAT
GCGGAAGTCC TGTTCCGCAA GCGCGAGGTC AGTGCTGGAC AGGAATGA
 
Protein sequence
MPFSAELLAS VRSGLRAVPP LHKAVRSIRD LADPDRRAMR RMLRRHAGHV LQPYPTTFED 
RYPEVFTALS ALLWDVPEPA ILSFGCSDGS EVRSLRRWFP RARIIGLDPN PRMIREARAH
LALNPDRGIS YIEANSTDAL GDMQFDAILA MAVFRHGRLE TEAPDRCDEV LPFAQFDKEV
TAMHRHLRPG GWLSVWNGHF RFRDTTIAPH YQARTLTFTR EVPLTLLYGR DNRRIDDEPY
AEVLFRKREV SAGQE