Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1955 |
Symbol | |
ID | 3917270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 2073483 |
End bp | 2074037 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640444702 |
Product | colicin V production protein |
Protein accession | YP_497229 |
Protein GI | 87199972 |
COG category | [R] General function prediction only |
COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGGGT TCGATTATGT GGTCCTTCTC CTCGTCGGCC TGGGTGCCGT CGGCGGCTTC TTTCGCGGCT TCGTGGAGGA AGTGCTCTCG CTTGCCGCCT GGTGCCTTGC GCTGCTCGCG GTCCACTATT TTCACGAACC TCTGACATAC TATCTCGCGT CGCACCTGCC GACCGAAACT GGTGCGGGCG TGCTGGCCTT TTTCCTGCTT TTGCTGGCTC CCTACCTGCT GACCCGCTTC ATCGCGCGCC GGATGGGCAG CGCCAGCCGA GGTTCGGCCA TCGGCCCGAT CGATCGTATC CTCGGCTTCG GATTCGGGGC GGTGAAGGGC TTCATTATCG TCGTCCTCGG TTATTCCATT GTCGTTTTCG GCTACGATCT GGTCTGGGGC GCGAACGGAC GTCCGCAATG GATCGTCGAG TCCCGGACCT ATCCGTTCCT GAATGCGGCG AGCGAGGAAT TGCTCACGCT TATCTCCGAG CGGCGGGAGC AAGCCGCCGA TCAGGCGCGC GAAGTCGCCC GACGCAAGGC GCGTGCCGCC GTCCTGGGTG ACTGA
|
Protein sequence | MTGFDYVVLL LVGLGAVGGF FRGFVEEVLS LAAWCLALLA VHYFHEPLTY YLASHLPTET GAGVLAFFLL LLAPYLLTRF IARRMGSASR GSAIGPIDRI LGFGFGAVKG FIIVVLGYSI VVFGYDLVWG ANGRPQWIVE SRTYPFLNAA SEELLTLISE RREQAADQAR EVARRKARAA VLGD
|
| |