Gene Saro_1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1955 
Symbol 
ID3917270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2073483 
End bp2074037 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content63% 
IMG OID640444702 
Productcolicin V production protein 
Protein accessionYP_497229 
Protein GI87199972 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGGT TCGATTATGT GGTCCTTCTC CTCGTCGGCC TGGGTGCCGT CGGCGGCTTC 
TTTCGCGGCT TCGTGGAGGA AGTGCTCTCG CTTGCCGCCT GGTGCCTTGC GCTGCTCGCG
GTCCACTATT TTCACGAACC TCTGACATAC TATCTCGCGT CGCACCTGCC GACCGAAACT
GGTGCGGGCG TGCTGGCCTT TTTCCTGCTT TTGCTGGCTC CCTACCTGCT GACCCGCTTC
ATCGCGCGCC GGATGGGCAG CGCCAGCCGA GGTTCGGCCA TCGGCCCGAT CGATCGTATC
CTCGGCTTCG GATTCGGGGC GGTGAAGGGC TTCATTATCG TCGTCCTCGG TTATTCCATT
GTCGTTTTCG GCTACGATCT GGTCTGGGGC GCGAACGGAC GTCCGCAATG GATCGTCGAG
TCCCGGACCT ATCCGTTCCT GAATGCGGCG AGCGAGGAAT TGCTCACGCT TATCTCCGAG
CGGCGGGAGC AAGCCGCCGA TCAGGCGCGC GAAGTCGCCC GACGCAAGGC GCGTGCCGCC
GTCCTGGGTG ACTGA
 
Protein sequence
MTGFDYVVLL LVGLGAVGGF FRGFVEEVLS LAAWCLALLA VHYFHEPLTY YLASHLPTET 
GAGVLAFFLL LLAPYLLTRF IARRMGSASR GSAIGPIDRI LGFGFGAVKG FIIVVLGYSI
VVFGYDLVWG ANGRPQWIVE SRTYPFLNAA SEELLTLISE RREQAADQAR EVARRKARAA
VLGD