Gene Saro_1916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1916 
Symbol 
ID3917139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp2028031 
End bp2028711 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content62% 
IMG OID640444662 
ProductYhhN-like 
Protein accessionYP_497190 
Protein GI87199933 
COG category[S] Function unknown 
COG ID[COG3714] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.10888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGAAAC GTGCGCTGAT AGAGAAACGG CCTTGGCTGG TCGCCAGTCT GATTGCGGGC 
GTAAGCTACT GGCTGGCTGC AAAGGGACAT GTACCGGGGC TCTGGCTCAT TCTCTGGAAG 
GGTGCAGGGG TGGCTTTGCT GGCCGCCTAT GCCTGGGCCC ACCATCCGAC GCGCAATGCC 
CACGCGATCG CAATCGTCAT GGCGCTGGGC GCGGTCGGCG ACATGGTTCT GGAATTGAAT 
TTCAACGCGG GCGCCATAGC GTTCCTGCTG GGCCACCTTG CCGCAATAGC GCTCTATCTT 
GAATTCCGGC GCGATCAGCC TTCCGGAAGT CAGTGGGCTG CGGCAATCGC GACACTGCTT 
GCGGTACCGT TGATCGCCTA TCAGTTGACC GCCCGACCGG AGGTCGCGCT TTATGCCTTG 
GGTCTATCGG GCATGGCGGC GGCGGCTTGG CTCAGCAGCT TTTCACGCTA TCGCGTGGGG 
CTGGGCGCCA TGATGTTCGT GGCATCAGAC CTGCTGATTT TCGCCCGCAT GGGGCCATTG 
GCGGAAAGCA CTATTCCGGG GCTGCTAATC TGGCCGCTCT ACTACTTCGG CCAGTTCCTC 
GTCTGCACGG GCGTGATCGC CACCCTCAGG GCAAGAGGTG AGTTCGACAG GCCAGGCGTC 
AACTCGCGAT CGGCAATCTG A
 
Protein sequence
MPKRALIEKR PWLVASLIAG VSYWLAAKGH VPGLWLILWK GAGVALLAAY AWAHHPTRNA 
HAIAIVMALG AVGDMVLELN FNAGAIAFLL GHLAAIALYL EFRRDQPSGS QWAAAIATLL 
AVPLIAYQLT ARPEVALYAL GLSGMAAAAW LSSFSRYRVG LGAMMFVASD LLIFARMGPL 
AESTIPGLLI WPLYYFGQFL VCTGVIATLR ARGEFDRPGV NSRSAI