Gene Saro_1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1905 
Symbol 
ID3917126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp2018861 
End bp2019040 
Gene Length180 bp 
Protein Length59 aa 
Translation table11 
GC content60% 
IMG OID640444649 
ProductFlp/Fap pilin component 
Protein accessionYP_497179 
Protein GI87199922 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3847] Flp pilus assembly protein, pilin Flp 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.691555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTT TCCGTAACCT GCTCGCGAAC AACGAAGGCG CCACCGCAAT CGAATACGGC 
CTGATCGCCG CTCTCGTCGC CGTCGCCGCC ATCGGCGCCA TGAGCTCGCT GGGTACCTCG
CTGAGCACCA CCTTCAACAA CGTTTCGACC GAAATGGATA ACGCCAGCCC GACTGCCTAA
 
Protein sequence
MKLFRNLLAN NEGATAIEYG LIAALVAVAA IGAMSSLGTS LSTTFNNVST EMDNASPTA