| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1817 |
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| Symbol | |
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| ID | 3918376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 1916198 |
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| End bp | 1917394 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640444558 |
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| Product | lycopene cyclase |
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| Protein accession | YP_497091 |
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| Protein GI | 87199834 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR01789] lycopene cyclase
[TIGR01790] lycopene cyclase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCGA GACGCTGCGA CATTGCGATC CTTGGCGGAG GGCTTGCGGG CGGCCTCGTG
GCTCTCGCCC TGCGCCGTGC ACGTCCCGAC CTCTCGCTGC TGCTGGTCGA GCAGGGCGAG
CGGCTCGGCG GCAATCACGT GTGGTCGTTC TTCGGCAGCG ACGTGGGCAA CGAAGGCCGC
GCCTTGCTCG ACGGCATGTT TGTCGCCGCA TGGCCCGAAT ATACCGTCCA CTTCCCCGCT
TTCCGCCGAC GGCTGAAGAC GAGCTATTAT TCGATCACAT CGAGACGCTT TGACGCGGTG
CTTCGGGCCG CGCTCGGGCA GGACTCATTG ATCACCGGGG TCCGCGCGCT CGCGTGCAGC
GCCACCAAGG TGACGCTTTC GGAAGGCACC CGCATCGAGG CGGGCGCCGT TATCGACGCG
CGGGGCTTGC GCAACCTCCA GCACCTCACC GGCGGATGGC AGAAGTTCGT CGGCCGCCGG
CTCCGGCTCG CGCAGCCGCA CAGTCTCGAC GCGCCGATCG TCAAGGATGC TTCCGTCGAA
CAGATCGACG GCTACCGCTT CGTCTATTGC CTGCCCTTTG CCGCCGACGA GATCTTCGTC
GAGGACACCT ATTACTCCGA CAGCCCCGCG CTCGACGTGG CGGTGCTGGG CGAGAGGATC
GACGCCTATG TCGCGGCGCG CGGGTGGCAG GTGGCCGAGG TCCTTGGCGA GGAGCATGGC
GTGCTTCCGG TGGTAGCGGG CGGAAACTTC GACGCCTTCT GGCGGTCGAG CGGAGGCGCG
GTCGCCCGCG CCGGTGTTCG CGCCGGCCTG TTCCAGGCGG TCACCAGCTA TTCGCTGCCC
GATGCCGTGC GCTTTGCCCT GGCCCTCGCC CGGCAACCGG ACCTCGGCGG CGAGGCTCTG
GCCGCGTTCA GCGAAGCCTA CGCGCGCCGG CACTGGAAGC GCTCGGCGTT CCACCGCGCA
CTTTCCGCCA TGCTGTTCGC GGCGGCCCGG CCCGAGCATC GCTACCGCGT GCTCGAACGC
TTCTACCGCC TGGACCGCCG CCTTATCGAG CGTTTCTATG CCGGTCGGAC GACCCTTCTC
GACAAGGCGC GCATTCTTTC GGGCAAGCCG CCGGTACCGG TAACCAAGGC CATCGGCGTG
CTCACCGGCC TTGGCGCGCG CCCCAACCCA CTTTCATTTG CAGGAACCCG CGCATGA
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| Protein sequence | MTARRCDIAI LGGGLAGGLV ALALRRARPD LSLLLVEQGE RLGGNHVWSF FGSDVGNEGR
ALLDGMFVAA WPEYTVHFPA FRRRLKTSYY SITSRRFDAV LRAALGQDSL ITGVRALACS
ATKVTLSEGT RIEAGAVIDA RGLRNLQHLT GGWQKFVGRR LRLAQPHSLD APIVKDASVE
QIDGYRFVYC LPFAADEIFV EDTYYSDSPA LDVAVLGERI DAYVAARGWQ VAEVLGEEHG
VLPVVAGGNF DAFWRSSGGA VARAGVRAGL FQAVTSYSLP DAVRFALALA RQPDLGGEAL
AAFSEAYARR HWKRSAFHRA LSAMLFAAAR PEHRYRVLER FYRLDRRLIE RFYAGRTTLL
DKARILSGKP PVPVTKAIGV LTGLGARPNP LSFAGTRA
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