| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1779 |
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| Symbol | |
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| ID | 3918338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 1875794 |
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| End bp | 1877572 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640444520 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_497053 |
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| Protein GI | 87199796 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.856574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACTGG CTCGCGCCGC TCATTGCTCG CTCGCAGCGC TGGCGACCTG CTTCGCCGTG
CTGGGCGCCG TTCCGGCCAA TGCCAACAGC GCCGCCGTCG ACTATTTCCG TGGCCGGGCG
GACCGTACCG CCGTGCCCTC GCTGCTCAGC CAGGACGACC GCTCGTTCTA CAAGTCACTG
TTCGGCGCGA TCGAGCGAGA AGAATGGACC CAGGTCCAGG CCCTGTTCGC ACAGCGTGCC
GACGGCCCGC TGCATGACGT TGCCCGCAGC CAGTACATGC TCGCCGCAAC CTCGCCCAAG
GCCGAACTCG GCGCGCTGAC CGACGTGCTG AACCGCGCGC CGAACCTGCC TTGGGCCGAA
CAGCTTGGCC GCCTGGCGCT CAAGCGCGGG GCGAGCGAGC TTCCCGCCCT ACCGCAGGGT
CAGCGCCTGG TTTCGCTGCC CAGCGTATCG AAGCGTATCC GCCCGCGCTC CATCACCGAC
GGCTCCATGC CCGATGCAGT CTCTGCCGCG ATCATGGACC GCATCAAGTT CGACGATCCG
GTCGGAGCGC GCGTGCTGCT CGACGGCGTC GACGCCACCC TTTCGCCCGA AGCGCGGACC
GAATGGCGCC AGAAGATCGG CTGGGCCTTC TACATCGAGA ACGACGACGC GACCGCCCGC
GCCATTGCGC TTTCGGCTGC GGAAGGCGGC GCGGGGCCTT GGGTATCCGA GGCGCATTGG
ACCGCAGGCC TTGCGAGCTG GCGCCTTGGC GATTGCATGG CCGCTGCGGA ATCCTTCGAA
AGGACTGCCG CCCTCGCCCA CAACGAGGAA CTCGCCTCGG CCGCGAACTA CTGGGCAAGC
CGCGCCTGGC TGCGCTGCCG CAAGCCCGAG AAGGTTTCCG GCGCCCTGCG CTCTGCCGCG
CGATACCGCG ACACGCTCTA CGGCATGATG GCCAGCGAGG CGCTCGGCCT GCGCGATAGC
CAGCCCGCCG CCGCCCCCGA TTTCTCGCAG GCGGACTGGC AGCAATTACG CGACGTTCCC
AACATCCGCA CCGCCGTCCA GCTTGCCGAG ATCGGCGAGG ACGGGCTCGC GGACGAGATC
CTGCGTCATC AGGCGCGCAT CGGTGCGCCG GGCCAGTACG CCCCGCTCTC GCGGCTTGCC
CGCGACCTCG GCCTGCCCTC GACCCAGCTC TGGATGGCGT ACAACGCGCC TTCGGGTGCC
CGGCCCGACG AAGCCGCCCG CTTCCCCGCG CCCAAGTGGA CCCCGGCAAC CGGCTGGAAG
GTCGACCCGG CGCTCCTCTT CGCCCATTCG TTGCAGGAAT CGAACTTCCG CACCGCCGTT
ACCAGCCCGG CCGGCGCCAA GGGCCTCATG CAGGTGCGCC CCGGCACCGC GCGCGACATG
GCCCGCGTGG AACCGCTCAT GGCCGGGCGC GATCGCCAGC TCGACCTGCC GGACGTGAAC
CTCGCGTTCG GCCAGCAGTA TCTCCAGCAG CTCCGCGATG CCGAGGCCAC GCAAGGCCTG
CTGCCCAAGG TCATGGCGGC CTACAACGCC GGGCCGCTGC CGGTGGCGCG CTGGAACACC
GAGATCCGTG GCGGCAGCGA TCCGCTGCTG TGGATGGAAT CGATCCCCTA CTGGGAAACG
CGCGGCTATG TGGCCATCGT CATGCGCAAC TACTGGATGT ACGAAAGGCA GGCGGGCGGC
CCGTCCGACA GCCGGCTCGG CCTCGTCCAG GGCATGTGGC CGAAGTTCCC GGGCCTTGCG
GGAGCGGACA ACGTAAGGAT CGCTTCGCGT GGCAATTGA
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| Protein sequence | MKLARAAHCS LAALATCFAV LGAVPANANS AAVDYFRGRA DRTAVPSLLS QDDRSFYKSL
FGAIEREEWT QVQALFAQRA DGPLHDVARS QYMLAATSPK AELGALTDVL NRAPNLPWAE
QLGRLALKRG ASELPALPQG QRLVSLPSVS KRIRPRSITD GSMPDAVSAA IMDRIKFDDP
VGARVLLDGV DATLSPEART EWRQKIGWAF YIENDDATAR AIALSAAEGG AGPWVSEAHW
TAGLASWRLG DCMAAAESFE RTAALAHNEE LASAANYWAS RAWLRCRKPE KVSGALRSAA
RYRDTLYGMM ASEALGLRDS QPAAAPDFSQ ADWQQLRDVP NIRTAVQLAE IGEDGLADEI
LRHQARIGAP GQYAPLSRLA RDLGLPSTQL WMAYNAPSGA RPDEAARFPA PKWTPATGWK
VDPALLFAHS LQESNFRTAV TSPAGAKGLM QVRPGTARDM ARVEPLMAGR DRQLDLPDVN
LAFGQQYLQQ LRDAEATQGL LPKVMAAYNA GPLPVARWNT EIRGGSDPLL WMESIPYWET
RGYVAIVMRN YWMYERQAGG PSDSRLGLVQ GMWPKFPGLA GADNVRIASR GN
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