Gene Saro_1719 details

Gene Information

• Locus tag: Saro_1719
• ID: 3916294
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 1807270
• End bp: 1809192
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640444460
• Product: glycoside hydrolase family protein
• Protein accession: YP_496993
• Protein GI: 87199736
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1472] Beta-glucosidase-related glycosidases

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCGGCT TGAAGATTTC TGCACCAATG GTGCTGCTTG CCGGTGTCGG GGCGGTCGCG 
CTGGGGGCAT CCGCGTCGGC AAGGCCCGCC TTTCGCGACC TGAACCACAA TGGCCGGCTC 
GATCCATACG AGAACGTCGC GCTGCCGGTC GAACGGCGGC TCGACGATCT GCTCAAGCGG 
ATGACGCTGG AGGAAAAGGT CGCGCTCATG CTCCACGGAA CGCTTCAGGC CGAAGGCGGA 
CGCGGCATCG GGGTGGGCAA TGCCTACGAC ACGGCCCTTG CGCAGGAACT CCTTGCGCGC 
GGGGTCAACA GTTTCATCAC CCGCATCGCA CCCGAACCCC GCGCCTTCGC GACGCAGAAC 
AATGCGATCC AGCGGCTTGC CGAGGCGACC CGGCTCGGCA TTCCCGCCAC GATCAGCACC 
GATCCGCGCA ATCACTTCCA GGTAGTGGTC GGCGCAAGCA GCGATGCCAG CGGCTTCTCC 
AAATGGCCCG AGACGCTCGG CATGGCCGCC ATCGGCGACG AGAAGCTGGT TGAGCGGTTC 
GGCCGACTGG TCGCCGCCGA ATATCGCGCC GTCGGCATCC AGATGGCCCT GTCGCCACAG 
GCCGACCTCT ATACCGAGCC ACGCTGGCCG CGCGGCAACG CGACGTTCGG CTCGGACCCG 
GCCACGGTCT CGCGTCTTGC CGGTGCATAT GTGCGCGGGT TCCAGGGCGG CGCGGACGGA 
CTCGTCCGCT CTGGCGTCGC GACCGTGGTC AAGCACTGGG TCGGCTATGG CGCCGAGCCC 
GAGGGCTTTG ACGGCCACAA CTATTACGGC CGCATCGCCC GTCTCGACAA CGAAAGCTTC 
GCCCAGCACG TTGCCGCTTT CGAAGGCGCG CTCGCCGCGA AGTCGGCAGG CGTAATGCCC 
ACCTATGTCA TCGCGGAGGG CGTGAGCATC GATGGCAAGC CGCTGCCGCA GGTCGGCGCG 
GGCTTCAGCA AGCCTCTGAT CGAGGGACTT CTGCGCGGCA CCCACAAGTT CGGCGGCATC 
GTCATTTCCG ACTGGGGCAT CACCAACACC TGCCCCGAAC AGTGCAGCAA CCCGACGGCC 
GAAAAGCCCC AGGGCTTTGC GATCGCGATG CCGTGGGGCG TCGAGGGTCT GTCCGAGGAA 
GACCGCTACG CGCTGGGCGC GAATGCCGGG ATCGACCAGT TCGGCGGCGT CGACAATCCA 
GGCCCTCTGC TTGCCGCCGT CCGTGCCGGG AAGGTTTCGC CCGCCCGGGT CGATCAGGCC 
GCCCGCCGCG TGCTTCGCCT GAAGTTCGAG CTTGGCCTGT TCGACGATCC CTATGTCGAC 
GTCGAGAAGG CAGCGCAGAT CGTCGGCAAC AAGGCGACGC AGGCCGAGGC CGATGCAGCC 
CAGCGCGCCG CGCAGGTGCT GCTGTTGAAC CGCAACGCGC TTCTGCCGCT CGCGCCGGGC 
CGAAAGGTTT GGCTCTCCGG TGTCGACGCC AGTGCCGCGC GTGCTGCCGG GCTGGTCGTG 
GTGGACACCG CCGAACAGGC CGAGGTGGCC ATCGTTCGCG TTGCCACCCC GCACGAAGTC 
CTTCATCCTC ACCACTTCTT CGGCTCGCGC CAGAACGAGG GCCGCCTCGA CTTCCGTGCT 
GGAGACGAGG CGACCAGAAC CATCGCCGCT GCCGCTGCGC GCATCCCGAC CGTTGTGGCC 
GTCGACCTCG ATCGTCCTGC CGTGCTGACC GAGGTGAAGG ACAAGGCTAC CGCGCTCTTC 
GGCCTGTTCG GCGCCAGCGA TGCCGTGTTG CTGGATCTCG TCACCGGCAA GGCCCGGCCG 
GCGGGCAAGC TGCCGTTCGA ACTGCCGTCC TCGGCAAAGG CGGTCGAGGA TCAGCATCCG 
GGCCGACCGG ACGACAGCGC CAACCCGCTC TTCCGGCGCG GTGACGGGCT GACCTATCCC 
TGA 

 

Protein sequence

MGGLKISAPM VLLAGVGAVA LGASASARPA FRDLNHNGRL DPYENVALPV ERRLDDLLKR 
MTLEEKVALM LHGTLQAEGG RGIGVGNAYD TALAQELLAR GVNSFITRIA PEPRAFATQN 
NAIQRLAEAT RLGIPATIST DPRNHFQVVV GASSDASGFS KWPETLGMAA IGDEKLVERF 
GRLVAAEYRA VGIQMALSPQ ADLYTEPRWP RGNATFGSDP ATVSRLAGAY VRGFQGGADG 
LVRSGVATVV KHWVGYGAEP EGFDGHNYYG RIARLDNESF AQHVAAFEGA LAAKSAGVMP 
TYVIAEGVSI DGKPLPQVGA GFSKPLIEGL LRGTHKFGGI VISDWGITNT CPEQCSNPTA 
EKPQGFAIAM PWGVEGLSEE DRYALGANAG IDQFGGVDNP GPLLAAVRAG KVSPARVDQA 
ARRVLRLKFE LGLFDDPYVD VEKAAQIVGN KATQAEADAA QRAAQVLLLN RNALLPLAPG 
RKVWLSGVDA SAARAAGLVV VDTAEQAEVA IVRVATPHEV LHPHHFFGSR QNEGRLDFRA 
GDEATRTIAA AAARIPTVVA VDLDRPAVLT EVKDKATALF GLFGASDAVL LDLVTGKARP 
AGKLPFELPS SAKAVEDQHP GRPDDSANPL FRRGDGLTYP