| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1658 |
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| Symbol | |
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| ID | 3918767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 1735553 |
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| End bp | 1737718 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640444399 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_496932 |
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| Protein GI | 87199675 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0104457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAC CGGCGAGCGC CATCGATGCC CTTCTGGACG GGACGCACGC CGATCCTTTC
TCGCTTCTCG GCATCCACGA AGGACCGGAC GGCGCCTTCG CCCGCGCCGT CCTGCCCGGC
GCGGAAGAGG CCGTGGCATG GTCGCTCTCG GGCAAGAAGC TGGGCAAGCT CAGCCGCGTC
GACGGGCGCG GCCTGTTCGA AGGCAAGGTA AAGGGACCGC GCCAGCCAGT CCGCTATGCC
TGCAAGGCCG ATGGGCACGA ATGGCTCGTC ACCGACCCCT ATTCCTTCGG CCCCGTCCTC
GGCCCGCTCG ACGATTTCCT GATCGCCGAG GGCACGCATC TGCGGCTGTT CGACAAGATG
GGTGCGCACC TGATCGAGCA CGAGGGCGCG CGCGGCGTGC ACTTCGCGGT TTGGGCGCCC
AACGCGCGGC TCGTCTCGGT CGTCGGTGAT TTCAACGACT GGGATCACCG CCGCCACCCG
ATGCGCCGCC GGGCGGACAT CGGCGTCTGG GAAATCTTCA TTCCCGACAT CGGCGAACAT
CGCGCCTACA AGTACCGCAT CGTCGGCCAC GACGGCGGTG TGCTTCCGCT CAAAGCCGAT
CCCTATGCGC TTGCCGCCGA ATTCCGCCCC AGCACCGCCT CGCTCACCGC GCACCCGGTC
AAGATGGACT GGGCCGACGC CGCCCACCGC GCGCACTGGG CCTCGGTCGA CGCGCGCCGC
GAGCCGATGT CGATCTACGA GGTCCACCCC GGCTCGTGGC AGAAGCCGCA CGAGGAAGGC
TTCCATACCT GGGATGAGTT GGCCGACCGC CTGATCCCCT ATGTCGCGGA AATGGGCTTC
ACCCACATTG AATTCCTGCC CGTCTCCGAG CACCCCTACG ATCCGAGCTG GGGCTACCAG
ACGACCGGCC TCTACGCCCC GTCAGCCCGC TTCGGCCCGC CGGAGGGGTT CGCCCGTTTC
GTCGATGGCG CCCACCGGGC GGGCATTTCC GTCCTTATCG ACTGGGTCCC TGCCCACTTC
CCGACGGACG AGCACGGCCT CGTCCGTTTT GACGGCACAG CGCTCTACGA ACACGAAGAC
CCTCGCCTCG GCTTCCATCC CGACTGGAAC ACGCTGATCT ACAACTTCGG CCGCCGCGAG
GTCGTCAGCT TCCTCGTCAA CAACGCGCTG TTCTGGGCCG AACGCTATCA TGTCGACGGG
CTGCGCGTGG ATGCGGTCGC CTCGATGCTG TACCGCGACT ACTCGCGCAA GGCTGGCGAG
TGGATTCCCA ACGCCGAAGG CGGCCGCGAG AACTGGGAAG CGGTCGAGTT CCTCAAGGCG
ATGAACCGGG CCGTCTATGG CAGCCACGCC GGCTTCCTCA CCATCGCCGA GGAATCAACC
GCGTGGCCCG GCGTATCCAA ACCGGCGTTC GATGGCGCCC CGCGCGAGAA CCTCGGCTTC
GGCTTCAAGT GGAACATGGG CTTCATGCAC GATACGCTGA AGTACATGGC GCGCGAGCCG
ATCCACCGCC GCTACCATCA CGATGAGATC ACCTTCGGCC TGATGTACGC CTTCAGCGAG
AACTTCGTCC TGCCGCTGAG CCATGACGAA GTGGTCCACG GCAAGGGCAG CCTGCTCAAC
AAGATGAGCG GCGATGACTG GCAGAAGTTC GCCAACCTGC GCGCCTATTA CGGGCTGATG
TGGGGCTATC CCGGCAAGAA GCTGCTGTTC ATGGGCCAGG AATTCGCCCA GCGCCGCGAG
TGGAGCGAGG CTCGCGCGCT CGACTGGGAC CTGCTCCAGG CTCCCGCCCA CGAGGGCATC
CGCCGCTGGG TACGCGATCT CAACCGCGTC TATGCCAGCC GCCCCGCACT CCACGCCCGC
GATTGCGAGC CGGAAGGGTT CGAATGGCTG GTGGTGGACG ATGCGGAAGC CTCGATCTTC
GCCTGGCTGC GCAAGGCACC GGGCGCAAGG CCGGTCGCTG TGATCTGCAA CATGACCCCG
CAGGTCCACG ACCACTATCG CCTGCCGCTT CCGCTCGATG GGGAATGGCG CGAGGTCCTG
AACAGCGATG CCGAGGACTA TGGCGGCAGC GGCATCGGCA ATCTTGGCAA GGTCACTGCC
GAACAAGGCG CCGCTTTCGT GGTCCTCCCG CCGCTGGCCA CGCTGATGCT TGAATTCGAA
GGATAA
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| Protein sequence | MKPPASAIDA LLDGTHADPF SLLGIHEGPD GAFARAVLPG AEEAVAWSLS GKKLGKLSRV
DGRGLFEGKV KGPRQPVRYA CKADGHEWLV TDPYSFGPVL GPLDDFLIAE GTHLRLFDKM
GAHLIEHEGA RGVHFAVWAP NARLVSVVGD FNDWDHRRHP MRRRADIGVW EIFIPDIGEH
RAYKYRIVGH DGGVLPLKAD PYALAAEFRP STASLTAHPV KMDWADAAHR AHWASVDARR
EPMSIYEVHP GSWQKPHEEG FHTWDELADR LIPYVAEMGF THIEFLPVSE HPYDPSWGYQ
TTGLYAPSAR FGPPEGFARF VDGAHRAGIS VLIDWVPAHF PTDEHGLVRF DGTALYEHED
PRLGFHPDWN TLIYNFGRRE VVSFLVNNAL FWAERYHVDG LRVDAVASML YRDYSRKAGE
WIPNAEGGRE NWEAVEFLKA MNRAVYGSHA GFLTIAEEST AWPGVSKPAF DGAPRENLGF
GFKWNMGFMH DTLKYMAREP IHRRYHHDEI TFGLMYAFSE NFVLPLSHDE VVHGKGSLLN
KMSGDDWQKF ANLRAYYGLM WGYPGKKLLF MGQEFAQRRE WSEARALDWD LLQAPAHEGI
RRWVRDLNRV YASRPALHAR DCEPEGFEWL VVDDAEASIF AWLRKAPGAR PVAVICNMTP
QVHDHYRLPL PLDGEWREVL NSDAEDYGGS GIGNLGKVTA EQGAAFVVLP PLATLMLEFE
G
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