| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1654 |
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| Symbol | |
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| ID | 3918763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 1729430 |
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| End bp | 1731196 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640444395 |
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| Product | isoamylase |
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| Protein accession | YP_496928 |
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| Protein GI | 87199671 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGCCGG GCGTCTTTCT GGCGGACGGC GCCACCCGCT TCTCCGTCCG CTCCCCTCGC
GCCGAGGCAC TGACGCTCTG CCTGTTCGAG GACGAAGCCG AGCAGCGTAT CGCGATGACC
CGCGTCGGCG ATAACTGGAT CGTTGAAATT CCAAGGGATC TGCGTGGCAT TCGCTACGGC
TACCGCGCGT CTGGCGAATG GAACCCGCCG GATGGTCTGT GGTTCGATCC TGCCAAGTTG
CTTGTCGATC CCTACGCAAT CGAGTTGGAC GGCAGCTTTG TGCAACACAC GAGCTTGTCC
ACCTACGGCG CTGACACGTC GAAAATTGTT CCCAAAGCAG TGGTTACCGC ACCGCCGGTG
ATTTCTCACC TCTCGCCGCT GTTCCGCCAC GGCGGGTTGA TCTACGAAGT CAACGTGCGC
GGGCTTACCA TGCTCCATCC GGATGTCCCG CAGCCGCTCC GGGGCACCGT CGCCGCGCTC
GCTCACCCGG CAATCATCGG CCATCTCAAG CAGTTGCACG TCTCGGCGGT GGAACTCATG
CCAATCGTCG CCTGGATCGA CGAGCGGCAC CTGCCCCCGC TCGGCCTCAC CAACGCCTGG
GGATACAACC CCGTCGCCCC CATGGCTCTC GATCCCCGCG TCTGTCCGGG CGGAGTCAGG
GAACTGCGCG AAACCGTGGC CACGTTGCGA GCCGAAGGGA TCGGCGTAAT CCTCGATATC
GTATTGAATC ACAGCGGGGA ATCCGACGTT CTCGGCCCCG TCCTTTGCCT CCGCGGTCTC
GATGACGCGG CCTATACCAA GGCGCCCGAC GGTAGGCTGA TCAACGACAC CGGCTGCGGC
AATACGCTCG ATTTCGGAAA TCCTGCCGTT CGCGCGCTGG CGCTCGATAC CCTGCGCCAC
TTCACAAGGC ATTGCGGCGT CGACGGTTTC CGCTTCGACC TCGCTCCCAT CCTCGCCCGC
AGCCCCGGCT TCGCCGCCGA CGCGCCGATC TTCCGCGAGA TCGCCGCCGA CCCGGTGCTG
GCCGACCGGG TGATGATCGC GGAGCCTTGG GACATTGGGC CCGGGGGATA CCAGCTCGGA
GGTTTCCCTT CTAACTGGCT GGAATGGAAC GACAGATTCC GAGACGACGT ACGACGATTC
TGGAAGGGTG AGACCGGCGT CGGCGCGCTT GCAACGCGGA TTGCCGGGTC TTCCGATATC
TTCGGCAAGG CCTGCCGAAC GGTCAATTTC CTGGCGGCCC ACGACGGCTT TACTCTCGCC
GATACGCTTG CCTACGAGCA GCGCCACAAC TGGGCGAACG GCGAGGAGAA CCGCGATGGA
CACGGCGAAA ATTTTAGCTG GAACAACGGC ATGGAGGGAG AAACGGACAA TCTGGACGTC
CTTTCCCGCC GCGCCGCCCT TGTACGCGCC ATGCTCGGGA CACTGTTCAT TTCGACCGGT
ACGATCCTGC TGACCGCCGG CGACGAATTT GGCCGGAGCC AGCGCGGCAA CAACAATGCC
TATGCGCAGG ACAACGAAAT CACCTGGATC GACTGGGACC GGCGGGACCG TGCCCTGGAA
GCGTGGACCT TCGGGCTATC CGCCTGGCGC CATTTGAGAA TTTCATCCTT CACCAGGTTT
CCGGAGGATG GAACCTGGCG TGACCTGAAC GGCACCGAAC TGCACACGAG CGCGTGGGAA
AGCGACCTGA CCCAGGGATT TTTCTGGCAG AATGGCAGCT ACGGCTTCGT GGTCGACCGG
ACCGCCCCGA TGGCAGGTCC GGTCTGA
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| Protein sequence | MTPGVFLADG ATRFSVRSPR AEALTLCLFE DEAEQRIAMT RVGDNWIVEI PRDLRGIRYG
YRASGEWNPP DGLWFDPAKL LVDPYAIELD GSFVQHTSLS TYGADTSKIV PKAVVTAPPV
ISHLSPLFRH GGLIYEVNVR GLTMLHPDVP QPLRGTVAAL AHPAIIGHLK QLHVSAVELM
PIVAWIDERH LPPLGLTNAW GYNPVAPMAL DPRVCPGGVR ELRETVATLR AEGIGVILDI
VLNHSGESDV LGPVLCLRGL DDAAYTKAPD GRLINDTGCG NTLDFGNPAV RALALDTLRH
FTRHCGVDGF RFDLAPILAR SPGFAADAPI FREIAADPVL ADRVMIAEPW DIGPGGYQLG
GFPSNWLEWN DRFRDDVRRF WKGETGVGAL ATRIAGSSDI FGKACRTVNF LAAHDGFTLA
DTLAYEQRHN WANGEENRDG HGENFSWNNG MEGETDNLDV LSRRAALVRA MLGTLFISTG
TILLTAGDEF GRSQRGNNNA YAQDNEITWI DWDRRDRALE AWTFGLSAWR HLRISSFTRF
PEDGTWRDLN GTELHTSAWE SDLTQGFFWQ NGSYGFVVDR TAPMAGPV
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