Gene Saro_1638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1638 
Symbol 
ID3918747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1713633 
End bp1714364 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content66% 
IMG OID640444379 
ProductPirin-like 
Protein accessionYP_496912 
Protein GI87199655 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.020318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGA CCAAGACCGG AACCGGCGCC CACATCGAAC TGCGCCCGTT CGCCTCCATC 
GGAGCGGCTA ACCACGGCTG GCTTGATGCC CACCACCATT TCTCGTTCGG CGAATACCAC
GATCCCGCCC GTACCAACTG GGGCGCGTTG CGGGTGTGGA ACGACGACGT GATCGCCGCG
AAGACCGGCT TCCCGCCGCA TCCGCACCGC GACATGGAAA TCGTCACCTA TGTTACCAAG
GGCGCGATCT CGCACCGCGA CAGCCTTGGC AACTCGGGCC GGACCGAAGC AGGCGACGTG
CAGGTCATGT CGGCGGGAAC CGGCATCCAG CATTCCGAAT ACAACCTGGA AGACGAGGAA
ACCCGCCTGT TCCAGATCTG GATCATCCCG GACCGTCGCG GCCACGCGCC GAGCTGGGGT
GCGCGCCCCT TCCCCAAGGA CAGCCGCGAA GGCCGTTTCG TGCCGCTGGC ATCGGGCATC
GAAGGTGACA CCGACGTGCT GCCGATCAAT GCCAATGCCC GCGTGCTGGG CGCGACCGTC
AAGGCCGGCG AGACCATACG CTACGCGCTG ACCGAAGACC GTCACGCCTA TCTCGTGCCC
GCCCGGGGCA GGATCCGCGT CGGCGATGTC GAAGCCAATG CCCGCGACGG CATCGCGTTG
ACGGGCCTTA GCGAGATCAT CGTCACGGCA CTGGAAGATG CCGAACTCGT CCTCGTCGAC
GCAGCGGCAT GA
 
Protein sequence
MTQTKTGTGA HIELRPFASI GAANHGWLDA HHHFSFGEYH DPARTNWGAL RVWNDDVIAA 
KTGFPPHPHR DMEIVTYVTK GAISHRDSLG NSGRTEAGDV QVMSAGTGIQ HSEYNLEDEE
TRLFQIWIIP DRRGHAPSWG ARPFPKDSRE GRFVPLASGI EGDTDVLPIN ANARVLGATV
KAGETIRYAL TEDRHAYLVP ARGRIRVGDV EANARDGIAL TGLSEIIVTA LEDAELVLVD
AAA