Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1566 |
Symbol | |
ID | 3917241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1623987 |
End bp | 1624754 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640444306 |
Product | IclR family transcriptional regulator |
Protein accession | YP_496840 |
Protein GI | 87199583 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.207708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCAAC CCGCGGTCAA GTCCGCGCTC CGTACGTTCG AAGTCCTCGA ACTCTTCGCT GAGCGTCGCG CCCCGCTGCG CCTGCAGGAC ATCCACTCGG CGCTCGGCTA TCCGCAATCC AGCACCACTG CGCTGCTCAA GAGCATGGTG ATGTGCGGCT ATCTCAACTA CGATCGCGAC CATCGCACTT ACCTGCCGAC CACGCGCGTC AGCATGCTCG GCAACTGGTT GCCCGGCTAC ATCCAGGCCG CAGGCGGCTA CCGCGAATTG GTCGAGGAAC TGCAGCGCCG GACCGATGAA ACGGTTGCGC TCATCACCCG CAACGATCTG TTCGTGCAGT ACATCATCCT GCTAACTCCA GATCACGAAC ACCAGATGGC CCCCCAGGTC GGAGCCATGC GCAAGCTTGT CGATTCTTCA GCCGGGCTTT CGCTCATGGC GCGAATGGAC GACCGTGCGA TCGACAAGCT GGTGCGTTAC TCCAACGCCT ACAACAGCGG CGATGATCTC CGCGTATCCT ATGCGCAGAT CATGCAGCAG GTCGATTGGG TGCGGAACGT GGGCTATGCC TATGTGCCCA ACCGGCCGAC GCCCGCCGTG TCCTCGATCA CCATGGCGCT CGATGCTGAT CTCTATGGCG TTCCATTGGC GCTTGGCGTC GGCGGGCTGG CTGGTCGGAT CGCGGATCGC AAGGACCAGA TCGTCGAGAC GCTTCGCGAA CTCGTCACGA CCTTCCGGCC TGCTCCCGGC GGAATATCGC GGACATGA
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Protein sequence | MSQPAVKSAL RTFEVLELFA ERRAPLRLQD IHSALGYPQS STTALLKSMV MCGYLNYDRD HRTYLPTTRV SMLGNWLPGY IQAAGGYREL VEELQRRTDE TVALITRNDL FVQYIILLTP DHEHQMAPQV GAMRKLVDSS AGLSLMARMD DRAIDKLVRY SNAYNSGDDL RVSYAQIMQQ VDWVRNVGYA YVPNRPTPAV SSITMALDAD LYGVPLALGV GGLAGRIADR KDQIVETLRE LVTTFRPAPG GISRT
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