Gene Saro_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1566 
Symbol 
ID3917241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1623987 
End bp1624754 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content62% 
IMG OID640444306 
ProductIclR family transcriptional regulator 
Protein accessionYP_496840 
Protein GI87199583 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.207708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCAAC CCGCGGTCAA GTCCGCGCTC CGTACGTTCG AAGTCCTCGA ACTCTTCGCT 
GAGCGTCGCG CCCCGCTGCG CCTGCAGGAC ATCCACTCGG CGCTCGGCTA TCCGCAATCC
AGCACCACTG CGCTGCTCAA GAGCATGGTG ATGTGCGGCT ATCTCAACTA CGATCGCGAC
CATCGCACTT ACCTGCCGAC CACGCGCGTC AGCATGCTCG GCAACTGGTT GCCCGGCTAC
ATCCAGGCCG CAGGCGGCTA CCGCGAATTG GTCGAGGAAC TGCAGCGCCG GACCGATGAA
ACGGTTGCGC TCATCACCCG CAACGATCTG TTCGTGCAGT ACATCATCCT GCTAACTCCA
GATCACGAAC ACCAGATGGC CCCCCAGGTC GGAGCCATGC GCAAGCTTGT CGATTCTTCA
GCCGGGCTTT CGCTCATGGC GCGAATGGAC GACCGTGCGA TCGACAAGCT GGTGCGTTAC
TCCAACGCCT ACAACAGCGG CGATGATCTC CGCGTATCCT ATGCGCAGAT CATGCAGCAG
GTCGATTGGG TGCGGAACGT GGGCTATGCC TATGTGCCCA ACCGGCCGAC GCCCGCCGTG
TCCTCGATCA CCATGGCGCT CGATGCTGAT CTCTATGGCG TTCCATTGGC GCTTGGCGTC
GGCGGGCTGG CTGGTCGGAT CGCGGATCGC AAGGACCAGA TCGTCGAGAC GCTTCGCGAA
CTCGTCACGA CCTTCCGGCC TGCTCCCGGC GGAATATCGC GGACATGA
 
Protein sequence
MSQPAVKSAL RTFEVLELFA ERRAPLRLQD IHSALGYPQS STTALLKSMV MCGYLNYDRD 
HRTYLPTTRV SMLGNWLPGY IQAAGGYREL VEELQRRTDE TVALITRNDL FVQYIILLTP
DHEHQMAPQV GAMRKLVDSS AGLSLMARMD DRAIDKLVRY SNAYNSGDDL RVSYAQIMQQ
VDWVRNVGYA YVPNRPTPAV SSITMALDAD LYGVPLALGV GGLAGRIADR KDQIVETLRE
LVTTFRPAPG GISRT