| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1554 |
|---|
| Symbol | |
|---|
| ID | 3917229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 1610570 |
|---|
| End bp | 1611058 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640444294 |
|---|
| Product | pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
|---|
| Protein accession | YP_496828 |
|---|
| Protein GI | 87199571 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.051984 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGGGGAAC GCATCGTGCG GCTTGACGAC GGCCTGTTTG AATTCCTGCA CCGCCCGCTG
ATGTGCATCA TTGCGGGCGT GGACCGACAG GGTCGTCCAT CGGCCGGGCG CGGAATAGGT
CTTCACGTGC CGGACGATCG GGAGACGATG GACGTGATCT TTTCGGCGTG GCAGTGGCCG
CAACTGGAAG CCGCGATTGG CGAGACCGCC CGGCTGGCCG TCACGTTCGT GAGCCCCGCC
GACTACGTGA CGTTCCAGAT CAAGGGGCCT GCCAGGCTGC GCGATGCCGA AGACGACGAC
CTCGCCCGGT CGGACAAGTT CATTGCCGAT GCCACCGGGG CACTCGTTTC GCTTGGGGTG
CCTGCCGAAA TCATTCCGCC ATGGCTGACC ACTCGCGGGG CGAAAGTGGC ACGGCTCGAC
ATCAGTGAAA TCTACGTCCA GACGCCCGGG CCACAGGCCG GCCTACTGGC CAGCATGAGG
CAGCCATGA
|
|---|
| Protein sequence | MGERIVRLDD GLFEFLHRPL MCIIAGVDRQ GRPSAGRGIG LHVPDDRETM DVIFSAWQWP
QLEAAIGETA RLAVTFVSPA DYVTFQIKGP ARLRDAEDDD LARSDKFIAD ATGALVSLGV
PAEIIPPWLT TRGAKVARLD ISEIYVQTPG PQAGLLASMR QP
|
|---|
| |