Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1527 |
Symbol | |
ID | 3917202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 1570927 |
End bp | 1571700 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640444268 |
Product | regulatory proteins, IclR |
Protein accession | YP_496802 |
Protein GI | 87199545 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGAAAGA AGGGCGTAAA ATCGGCAATG CGGACCTTCG AAGTCCTTGA GCTTTTCGAA GAAAAGCGCA AGCCATTGCG CTTACATGAA ATTTACAGCT CTCTGGAATA CCCGCAATCC AGCACAACAA ACTTGTTAAA GAGCATGGTG TCCATGGGAT ACCTAAACTA CAATCGTCGC AATAGAACCT ACCTTCCCTC GACCCGCATC AACATGCTTG GGAATTGGCT CCATGGATAT TTTCAGTCTT CCGGCGGATA CCGAAGCCTT GCAGAGGAGC TTCAACGGAG AATTGACGAG ACTGTTGGGA TAGTATGCCA GAATGATCTC TACATACAAT ACATCATCAT GCTAACACCC GCCCATGAGC ATAAACTCCC GCCCAACGCC GGCACGATGC GACTGATGAC GGATTCCAGT ACCGGGCTCG CGCTCATGGC CCGGATGAAG GATCGCGCGA TAGAAAAAAT TTGGCGTTTT ACAAACTACT ACAAGCTGAG TGAAAATAAC TCATACTCCC TGCCCGAACT TATGCGAGAA GTAAACTGGG TGAGGAAAGT AGGATATGCC TACATCGCCA AACGCGCAAC GCCTGTAACA TCGTCCATTG CGATGACTCT GGACGAGGAT TTGTTTGGAA TACCAATGGC CATTGGCGTC GGCGGCATGG CTGATAGAAT CGCAAAAAAT CAACACGACA TCGTTGAGAC CATGCGTGAT CTAATCGAAC GTTTTTCGAA AGAGCAGGTG AACTACAACC TTGAAAACAA ATAA
|
Protein sequence | MGKKGVKSAM RTFEVLELFE EKRKPLRLHE IYSSLEYPQS STTNLLKSMV SMGYLNYNRR NRTYLPSTRI NMLGNWLHGY FQSSGGYRSL AEELQRRIDE TVGIVCQNDL YIQYIIMLTP AHEHKLPPNA GTMRLMTDSS TGLALMARMK DRAIEKIWRF TNYYKLSENN SYSLPELMRE VNWVRKVGYA YIAKRATPVT SSIAMTLDED LFGIPMAIGV GGMADRIAKN QHDIVETMRD LIERFSKEQV NYNLENK
|
| |