Gene Saro_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1527 
Symbol 
ID3917202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1570927 
End bp1571700 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content48% 
IMG OID640444268 
Productregulatory proteins, IclR 
Protein accessionYP_496802 
Protein GI87199545 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAGA AGGGCGTAAA ATCGGCAATG CGGACCTTCG AAGTCCTTGA GCTTTTCGAA 
GAAAAGCGCA AGCCATTGCG CTTACATGAA ATTTACAGCT CTCTGGAATA CCCGCAATCC
AGCACAACAA ACTTGTTAAA GAGCATGGTG TCCATGGGAT ACCTAAACTA CAATCGTCGC
AATAGAACCT ACCTTCCCTC GACCCGCATC AACATGCTTG GGAATTGGCT CCATGGATAT
TTTCAGTCTT CCGGCGGATA CCGAAGCCTT GCAGAGGAGC TTCAACGGAG AATTGACGAG
ACTGTTGGGA TAGTATGCCA GAATGATCTC TACATACAAT ACATCATCAT GCTAACACCC
GCCCATGAGC ATAAACTCCC GCCCAACGCC GGCACGATGC GACTGATGAC GGATTCCAGT
ACCGGGCTCG CGCTCATGGC CCGGATGAAG GATCGCGCGA TAGAAAAAAT TTGGCGTTTT
ACAAACTACT ACAAGCTGAG TGAAAATAAC TCATACTCCC TGCCCGAACT TATGCGAGAA
GTAAACTGGG TGAGGAAAGT AGGATATGCC TACATCGCCA AACGCGCAAC GCCTGTAACA
TCGTCCATTG CGATGACTCT GGACGAGGAT TTGTTTGGAA TACCAATGGC CATTGGCGTC
GGCGGCATGG CTGATAGAAT CGCAAAAAAT CAACACGACA TCGTTGAGAC CATGCGTGAT
CTAATCGAAC GTTTTTCGAA AGAGCAGGTG AACTACAACC TTGAAAACAA ATAA
 
Protein sequence
MGKKGVKSAM RTFEVLELFE EKRKPLRLHE IYSSLEYPQS STTNLLKSMV SMGYLNYNRR 
NRTYLPSTRI NMLGNWLHGY FQSSGGYRSL AEELQRRIDE TVGIVCQNDL YIQYIIMLTP
AHEHKLPPNA GTMRLMTDSS TGLALMARMK DRAIEKIWRF TNYYKLSENN SYSLPELMRE
VNWVRKVGYA YIAKRATPVT SSIAMTLDED LFGIPMAIGV GGMADRIAKN QHDIVETMRD
LIERFSKEQV NYNLENK