Gene Saro_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1393 
Symbol 
ID3917848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1436386 
End bp1437084 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content69% 
IMG OID640444136 
Producttetratricopeptide TPR_4 
Protein accessionYP_496671 
Protein GI87199414 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4235] Cytochrome c biogenesis factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTGGG TGCTCGTCGT TCTGCTCGCC GGGGCCGTGT TCCTCGCGCT GGCCTTCGTC 
CTGAAGATGC CGCGCGCTGG GTGGGAGCTT TCGGGCGCCG CGCTGCTCGT CGGGATCGCC
GGCTATGCGT TGCAAGGCAG CCCCGATCTT CCCGGCGCTC CCAAGGCCCC GGTCGAGAAC
AAGCGCGCCG CCGACGAGGC TCTGATCAAG CAGCGCCAGC AGATGGGCGA CAGCTTCGCC
AAGGGCCAGA GCTGGCTGAT CCTTGCCGAC GGCCTCGCTC GCCAGGGCCA GTACGGCGCT
GCTGCCGAAG TCCTGCGCAA GGGCGCCGAG CAGTTTCCGC AAGATGCCGA CATCTGGGTG
TCGCTGGGCA ACGCACTGGT CGGTCACAGC GACGGCCTGA TCACGCCCGC CGCGCAATAT
GCCTTCCAGA AGGCGGCCCG CATCGCGCCG GATCATCCCG GTCCGCCTTT CTTCATGGGC
CTTGCGCTCG CCCAGTCCGG TCGCCTGCCG GAAGCGCGCG CGATCTGGGC AGAACTTCTG
CGCCGTTCTC CCGCCGACGC TCCGTATCGG GCCGATCTTT CGGAGCGAAT CCAGCGGATC
GATTCGATGC TGGCCATGGC GGCGGGTGGC GGCACGGCCG GCGCGCCGGT CCCGGCCCCC
GCGCCGATGG CTGATTCGTC TTCTCAAGTG TCTGAGTAG
 
Protein sequence
MTWVLVVLLA GAVFLALAFV LKMPRAGWEL SGAALLVGIA GYALQGSPDL PGAPKAPVEN 
KRAADEALIK QRQQMGDSFA KGQSWLILAD GLARQGQYGA AAEVLRKGAE QFPQDADIWV
SLGNALVGHS DGLITPAAQY AFQKAARIAP DHPGPPFFMG LALAQSGRLP EARAIWAELL
RRSPADAPYR ADLSERIQRI DSMLAMAAGG GTAGAPVPAP APMADSSSQV SE