Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1393 |
Symbol | |
ID | 3917848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1436386 |
End bp | 1437084 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640444136 |
Product | tetratricopeptide TPR_4 |
Protein accession | YP_496671 |
Protein GI | 87199414 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4235] Cytochrome c biogenesis factor |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTGGG TGCTCGTCGT TCTGCTCGCC GGGGCCGTGT TCCTCGCGCT GGCCTTCGTC CTGAAGATGC CGCGCGCTGG GTGGGAGCTT TCGGGCGCCG CGCTGCTCGT CGGGATCGCC GGCTATGCGT TGCAAGGCAG CCCCGATCTT CCCGGCGCTC CCAAGGCCCC GGTCGAGAAC AAGCGCGCCG CCGACGAGGC TCTGATCAAG CAGCGCCAGC AGATGGGCGA CAGCTTCGCC AAGGGCCAGA GCTGGCTGAT CCTTGCCGAC GGCCTCGCTC GCCAGGGCCA GTACGGCGCT GCTGCCGAAG TCCTGCGCAA GGGCGCCGAG CAGTTTCCGC AAGATGCCGA CATCTGGGTG TCGCTGGGCA ACGCACTGGT CGGTCACAGC GACGGCCTGA TCACGCCCGC CGCGCAATAT GCCTTCCAGA AGGCGGCCCG CATCGCGCCG GATCATCCCG GTCCGCCTTT CTTCATGGGC CTTGCGCTCG CCCAGTCCGG TCGCCTGCCG GAAGCGCGCG CGATCTGGGC AGAACTTCTG CGCCGTTCTC CCGCCGACGC TCCGTATCGG GCCGATCTTT CGGAGCGAAT CCAGCGGATC GATTCGATGC TGGCCATGGC GGCGGGTGGC GGCACGGCCG GCGCGCCGGT CCCGGCCCCC GCGCCGATGG CTGATTCGTC TTCTCAAGTG TCTGAGTAG
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Protein sequence | MTWVLVVLLA GAVFLALAFV LKMPRAGWEL SGAALLVGIA GYALQGSPDL PGAPKAPVEN KRAADEALIK QRQQMGDSFA KGQSWLILAD GLARQGQYGA AAEVLRKGAE QFPQDADIWV SLGNALVGHS DGLITPAAQY AFQKAARIAP DHPGPPFFMG LALAQSGRLP EARAIWAELL RRSPADAPYR ADLSERIQRI DSMLAMAAGG GTAGAPVPAP APMADSSSQV SE
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