Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1347 |
Symbol | |
ID | 3917798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1389958 |
End bp | 1392267 |
Gene Length | 2310 bp |
Protein Length | 769 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640444086 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_496625 |
Protein GI | 87199368 |
COG category | [C] Energy production and conversion |
COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGCGGAG CCCTTTCCAT CCACGGCGCG ACGCTCAGCC GCCGGGCCTT TGTCGGTGCC GGGGGCGCGT TGGTCGTCGC GCTCGGCCTG CCGGCCAGCG GCGCCCGCGC GGCAAGCGGA TCGAGCGACC CGGCAATCCC CGCCAACTGG ATCGAGATCA ACGCCGACAA CACCGTGCTG ATCCGCACTG GCAAGTGCGA CTTCGGCCAG AGCAGCATCT ACACCGCTTA TCGCCAGATC GTGGCCGAAG AACTGTCGAT GCCGATCGCG GCGATGACCA CGGTCGTTTC CGGCGATACC GACCGCACGC CCGACGGCGG CGGCACATTC TGGCTGCTCG GATACTCGCA GAACCTGCGC AAGGTCGCCG CGTTCATGCG CGAGGCCGCG CTGGAGCTGG CCGCGAAGAA GCTCGGTGTC GGACGGGACA AGCTTTCGGT CGCCGATGGC CGCATTTCGG GTGACGGCAA GTCCGTGACC TATGGCGAGC TGGTGCGCGG GCAGTCGCTT ACGCTGACGA TCCCGGTCGA GGGCGACCTT ACCAGCCCGA TGGGCCTCAC GGTGAAGGGC GAGCCGCCGA TGAAGCCGGT GGCCGATTAC ACCATCGTCG GCAAGCCGGT GCCGAACCCG ATGACGGGTC CCAAGATCTC CGGCGAGGCG GTATGGGTGG GTGACGTCAA GCTGCCCGGC ATGCTCCACG CGCGTGTGAT CCATCCCGAG ACGCTGGGGT CGACGCTGGA TAAGCCCGGC ACGCTCGATA CTGCGCAGTT CCCGGGCGCG CGCCTGGTGC GGATCGGCAA TCTCCTGGCG GTCGTCTCGC CCGAAGAGTG GGAGGCCGTT CAGGCCGCGC AGGCGGTTGC CGCAGACACG ACGTGGACCG CGTGGAAGGG CCTGCCCGGC CATGATGGCT TGCGCGACCA CATGCGCGAC AAGGCCGACT GGAAGAGCTT CCCGGTGCGC GACGGCGCCG CCAACAAGGG CGATCCGGCC GCCGTTACCG GAGCCAGGGT GCACCAAGCC GCGTACTTCC TGCCCTATCA CAAGCACGCG CCGATCAGCC CGATGGTCAC GCTGGCAGAC TACCGTCCCG ACGGTTCGGT TACCCTGCAC ACGCTTTCGC AGAACCCGCA GCACCTGCGA CGGATGATCG CTAAGATGCT GGGCACGGGG CAGGACAAGG TCGTGGTGCG GACCTATCCA GGATCCGGCC ATTATGGCCG TTCGAATGGC GGCAGTGCGG GCAGCGAGGA CGAGGCGGTG CTGCTTTCGC GCGAACTGGG GCGGCCCGTG CGCGTGCAGT GGATGCGCCA CGACGACATG CAGTGGTCGA CGCAGTCGTC CGCCGGTCTT TCCGACATTC GCATCGCGCT CGGCGCGGAT GGACGGATCG AGGGCTATTC CGCCGAACAC CGTGTGCCTC CGATGCAGGA CGATCGCCTG ATCGGCGCGC TGCTGGCGGG GTTGCCGGTC CTTGAAGCGC CTTCGGCCGA AACGCGCGAC GGTTTCCAGA ACGGCGTGAC CGATGTCCAG GACACATGGG TCTACGGCAA GGTCGGCGCC GTGCGCGAGA AGGGGCTCGG CACCTGGCAG GTCGGCCAGC GGGAATCTCC GATTGCGGTG GGCCTGCGCG ACCATTCGAT GCGCACGCCG ATCCAGTTCC AGCAGAACTT CCCGCGCGAG CTGGCGATCA GCGAGGCGGC GATGCTTGCG GGGAAGGATC CGCTGCAGTT CCGGCTCGAC CATGTCACCG ATCCGCGCTT CACCGCCATT CTCGAGCGGC TGCGCAAGGA GTCCGGTTGG CAGGCGCGAC CGTCTCCAGC CCCGGGCGCG AAGGCATCGG GCAAGGGTGC GGTCAAAGGG CAGGGCGTAT CGATCATGCT GCGCGACAAT GGCTACTGGG CCTGTGCCGC CCACGTATCC GTCACGCCAG ACAGCGGCGA GGTGAAGGTC GAGCGGATGA CGATGGTTGC CGACGTCGGC ATCGTCATCA ACCCGCTGCA ACTGCGCCGC CAGATCCAGG CCGGTTGCCT GATGGGCGTG AGCCAGGCCC TGCACGAGGA AGTCGCGTTC GACGAAGGTG CGATCACTTC CGCCGATTGG TCTGGCTATC CCATCCTGAC CATGGCCGAG ATGCCGGAGC TGCGGATCTT CTTCGAGACA AACCCTGCCG TCGGCAACTA TGGCCAGGGT TCGGAAAGCG CCAATGCGCT GGCGGCGCCT GCCATCGCGG CGGCTGTGAT GGACGCCACC GGAAAGCCGG TACGCCGACT GCCCCTGCGG CCAGACTACG TGAAGGTGGC GCTCTCCTGA
|
Protein sequence | MSGALSIHGA TLSRRAFVGA GGALVVALGL PASGARAASG SSDPAIPANW IEINADNTVL IRTGKCDFGQ SSIYTAYRQI VAEELSMPIA AMTTVVSGDT DRTPDGGGTF WLLGYSQNLR KVAAFMREAA LELAAKKLGV GRDKLSVADG RISGDGKSVT YGELVRGQSL TLTIPVEGDL TSPMGLTVKG EPPMKPVADY TIVGKPVPNP MTGPKISGEA VWVGDVKLPG MLHARVIHPE TLGSTLDKPG TLDTAQFPGA RLVRIGNLLA VVSPEEWEAV QAAQAVAADT TWTAWKGLPG HDGLRDHMRD KADWKSFPVR DGAANKGDPA AVTGARVHQA AYFLPYHKHA PISPMVTLAD YRPDGSVTLH TLSQNPQHLR RMIAKMLGTG QDKVVVRTYP GSGHYGRSNG GSAGSEDEAV LLSRELGRPV RVQWMRHDDM QWSTQSSAGL SDIRIALGAD GRIEGYSAEH RVPPMQDDRL IGALLAGLPV LEAPSAETRD GFQNGVTDVQ DTWVYGKVGA VREKGLGTWQ VGQRESPIAV GLRDHSMRTP IQFQQNFPRE LAISEAAMLA GKDPLQFRLD HVTDPRFTAI LERLRKESGW QARPSPAPGA KASGKGAVKG QGVSIMLRDN GYWACAAHVS VTPDSGEVKV ERMTMVADVG IVINPLQLRR QIQAGCLMGV SQALHEEVAF DEGAITSADW SGYPILTMAE MPELRIFFET NPAVGNYGQG SESANALAAP AIAAAVMDAT GKPVRRLPLR PDYVKVALS
|
| |