Gene Saro_1343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1343 
Symbol 
ID3917793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1384468 
End bp1385775 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content66% 
IMG OID640444081 
Productadenosylmethionine--8-amino-7-oxononanoate transaminase 
Protein accessionYP_496621 
Protein GI87199364 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID[TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCACAGT GCGCGAGGGA CAGGACGATG AGCGATCCGC AGTGGTATTC GACGGGGCGC 
GACCACGTCT GGCTTCCCTA TACCCAGATG AAGACGGCAC GCCCGCCGCT GCCGGTGGCT
TCAGCCGAAG GGGTGAAGCT TCGCCTCGCG GACGGGCGCG AACTGGTCGA CGGCATTTCG
AGCTGGTGGG CCACGGTTCA CGGCTATCGT CACCCGCACA TCGAGGAGGC GATCCGGCGC
CAGCTTGAAA CCCTGCCGCA CGTCATGCTG GGCGGGCTGG CGCACGAACA GGCCTATACC
CTTGCGCGGC GGCTTGCAGG AATGCTGCCG GGCGACCTCG ATCATGTGTT CTTCAGCGAT
TCCGGGTCTG TCGCAGTCGA GGTTGCGATG AAGATGGCGG CGCAGTTCTG GCTCAACCAA
GGGCACCGGC GCGTGAAGTT CCTGTGCTTC CGTGGCGGTT ACCATGGAGA CACCTTTGCC
ACGATGAGCG TGTGCGACCC TGACGAGGGC ATGCACAGCC TGTTCCGTGG TGCGCTGCTG
GAACAGGTGG TGGTCGACCT GCCAAGGGAT GCGGAAGGCG AAGCGGCGCT TGGCGCCTTG
ATCGAGCAGC ATCGCGGGGA ACTCGCCGGG ATCGTGGTCG AGCCCTTGGT GCAGGGGGCA
GGGGGGATGG TGTTCCATGA CCCGTTTACG CTCCAGGCGC TGCGGCGGCT CGCGGATGAG
CATGAGCTTC TGCTGATCTT CGACGAGATC TTCGTCGGCC TTGGCAGGCT GGGCGATGCG
ATGTTCGCCT GTCAGATCGC GGGCGTGCAG CCGGATATCG TGACATTGTC CAAGGCGCTG
ACCGGGGGCA ACCTGCCGCT CGCCGCCACC ATCGCCAGCG GGCGCATCTA CGACGCATTC
CTCTCTGACG ATCCGATGCA TGCGCTGATG CACGGGCCGA CCTACATGGG GAATGCGCTG
GGCTGCGCCG CGGCCAATGC CTCGCTCGAC CTCTTCGAGA GCGAGCCCAG GCTGGAGCAG
GCGCAGGCCA TCGGACGCGG GCTCGAGCAG GCGCTGGAGG TATTGCGCGG CCTGCCGGGC
GTGCGCGACG TGCGCGTGCG CGGCGCCATC GGCGTGATCC AGCTTGACCG AACCGCCCCC
GCCGACCGCC TCTCCGCGGC CTGCATCGAC CGCGGCGTGT GGCTGCGCCC GTTCCGCGAT
ATTCTCTACA CTACGCCCCC GCTGGTGACG GGTGAGGAAG ACCTTGCGAG GATCACCAGC
GCAATGGTTG AAGCAGTCAC CGAATGGAGC CGCGAAACCC ACGTCTGA
 
Protein sequence
MAQCARDRTM SDPQWYSTGR DHVWLPYTQM KTARPPLPVA SAEGVKLRLA DGRELVDGIS 
SWWATVHGYR HPHIEEAIRR QLETLPHVML GGLAHEQAYT LARRLAGMLP GDLDHVFFSD
SGSVAVEVAM KMAAQFWLNQ GHRRVKFLCF RGGYHGDTFA TMSVCDPDEG MHSLFRGALL
EQVVVDLPRD AEGEAALGAL IEQHRGELAG IVVEPLVQGA GGMVFHDPFT LQALRRLADE
HELLLIFDEI FVGLGRLGDA MFACQIAGVQ PDIVTLSKAL TGGNLPLAAT IASGRIYDAF
LSDDPMHALM HGPTYMGNAL GCAAANASLD LFESEPRLEQ AQAIGRGLEQ ALEVLRGLPG
VRDVRVRGAI GVIQLDRTAP ADRLSAACID RGVWLRPFRD ILYTTPPLVT GEEDLARITS
AMVEAVTEWS RETHV