Gene Saro_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1116 
Symbol 
ID3916412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp1162772 
End bp1163389 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content66% 
IMG OID640443851 
ProductHhH-GPD 
Protein accessionYP_496395 
Protein GI87199138 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGTCTTA GCGCAGAGGC AATCCGCGAA GGACTGGACC ATATTGCCGC CCGGTCTCCG 
GCGCTGGCCG ATGCGATCGA ACGCGTCGGA TACCCCGAGC CGCGCATAAG GCCGACCGGC 
TATCGCACGC TGTTGCGCAC GATTGTCGGG CAGCAGGTCA GCGTGTCGGC GGCGGCATCG 
GTGTGGAACA AGCTGGAGGC CCTGCTGGGC GAAGACCTGC CCCCGCATGA CCTGCTCGCG 
GCCGACTTCG ACGCGTTGCG CGCCTGCGGC CTGTCACGCC AGAAGCAGGG CTACGCGCGC 
AGTCTTTGCG AACTGGTGGT ATCCGGCGAA CTCGATTTCG ATTCGCTGCC GCAGGACGAC 
GAGGAGGCGA TTGCCGAACT CGTGAAGATC AAGGGGATCG GGCGCTGGTC GGCGGAAATC 
TACCTCCTGT TCGCGGAGGG GCGGCCTGAT ATCTGGCCGG CGGGCGACCT TGCAGTCCAG 
GTGGGGCTGG GGCGATTGCT CGGACTGCCG GAACGTCCGA GCGAGAAGGA TACGCGCGTC 
CTGGCCGAAC AGTGGCGGCC CCATCGCGGC GCGGCGGCGA TCTTCACCTG GCATTGCTAT 
AACAATCCGG CGCTGTAG
 
Protein sequence
MGLSAEAIRE GLDHIAARSP ALADAIERVG YPEPRIRPTG YRTLLRTIVG QQVSVSAAAS 
VWNKLEALLG EDLPPHDLLA ADFDALRACG LSRQKQGYAR SLCELVVSGE LDFDSLPQDD 
EEAIAELVKI KGIGRWSAEI YLLFAEGRPD IWPAGDLAVQ VGLGRLLGLP ERPSEKDTRV 
LAEQWRPHRG AAAIFTWHCY NNPAL