Gene Saro_1060 details

Gene Information

• Locus tag: Saro_1060
• Symbol: uvrC
• ID: 3916356
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 1102691
• End bp: 1104667
• Gene Length: 1977 bp
• Protein Length: 658 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640443795
• Product: excinuclease ABC subunit C
• Protein accession: YP_496339
• Protein GI: 87199082
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.41739
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCGCCGCG CGCCCGAGCG ACTATCTGCT TGTCACGCCA TGGCCCGCAA GCCCCAGACC 
CCGCCCGACC GAGAGACCGA GCGCTTCCAC GAGGAGCGGG CCGCCACGAC CCTGCGCGGC 
GCCGACCGGC CGGACATTGA GCTTGGCGCC GGTGTGATCC GCGAAACGGT ACAGACGCTC 
AAGCCCAAGC CCGGCGTCTA CCGCATGCTC GATGCGCGGG GCGATGTCCT CTACGTTGGC 
AAGGCGCGCG CTCTGAAGAA CCGGGTGGCG AACTACACCC AGGTCGAACG CCTGCCCAAC 
CGTCTTCGCC GCATGGTCAG CCAGACGCGC AGCATGACCA TCGTCACCAC CAATTCGGAA 
GCCGAGGCGC TGCTGCTCGA GGCACAGCTC ATCAAGCGTT TCCGGCCGCC CTACAATGTC 
CTGCTGCGTG ACGACAAATC GTTCCCCTTC ATCCTCCTGC GCGGGGATCA CGCGTTCCCG 
CGCATCAGCA AGCATCGCGG CGCGCGCAAG GCCAAGGGCA ACTACTACGG TCCGTTCGCC 
AGTGCCGGCA GTGTGAACAC CACGATCAAC GCGCTGCAGA AGCTGTTCCT GTTGAGGAGT 
TGCAACGACG GGTTCATGGC GCGGCGTGAC AGGCCGTGCC TGCTTTACCA GATCCGGCGC 
TGCTCGGCCC CTTGCGTCGG CCGGATATCG GAAGCCGACT ACGGCGAGCT GGTACGGCAG 
GCGAAGGATT TCCTCGGCGG AAAGTCGGGC GCGGTGCAGC GCGAGATCGA GGCGCAGATG 
CACAAGGCGG CCGAGGACCT CGATTTCGAG CGCGCCGCCA TGTTGCGCGA CCGGTTGCGC 
GCCGCGACGT TCATCCAGGG GAGCCAGGCG ATCAATGCCG AAGGCGTGGG CAATGCCGAT 
GTCTTCGCCA TGGCGACGAA GGGCGGGCAG GTGGCCGTGC AGGCCTTCTT CATCCGGGGC 
GGCCAGAACT GGGGCCACCG CGCCTTCTTC CCCAGCCACA CCGAGGGCTT GTCGGAAGAG 
GAAGTGATGA CCAGCTTCCT GGCGCAGTTC TACGAGGAAG TGCCGCCTGC AAGATTGATC 
CTCGTCGATC GCGCCTTGCC CGAGGCGGAT CTGCTGGCCG AAGCCTTGTG CGAAGCCGCC 
GGAGGGAAGG TCGAGATATC GGTGCCCCAG CGCGGCGACC GGCGCCGTCT CATGGAACAG 
GCGCAGCGCA ATGCCGTGGA AGCGCTCGAC CGGCGCATGG CCGAAAGCGG AACCAAGGCG 
AAGGTCATGC GGGAACTGGC CGAATTCCTC GAACTGCCTG AAGTCCCGCA GCGAATCGAG 
ATCTACGACA ACAGCCACAT CCAGGGGACC AATGCCCTTG GCGCGATGGT CGTCGCGGGG 
CCGGAAGGGT TTGTGAAGGG CCAGTACCGC AAATGGAACA TCAAGCTGGC CCAGACGAAT 
GACGACTTCG CGATGATGCG CGAGGTGATG ACCCGCCGCT TCGGGCGCGC GCAGGAGGAG 
GACCCCGATC GGGAAAGCGG CAACTGGCCC GATCTTGTGC TGATCGATGG CGGCAAGGGG 
CAGATGAGCG CGGTGAAGGA GGCCCTGGGC GAACTCGGCA TCGAGGACGT TCCGCTGGTT 
GCCATCGCCA AGGGCCCGCA CCATGGGCGC GAGGGGCGTG AGGTGTTCCA TTTTCCCGAC 
GGGCGCGAGA AGATGCTGCC GGTGAACTCG CCGGTGCTGT TCCAGCTTCA GGTCATGCGC 
GACGAAGTGC ACCGTTTTGC CATCGGCGCG CATCGGGCGA AGCGCAGCCG CGCGATCACC 
GCGAGCCCGC TGGACGAGAT TCCCGGAATC GGCCCCGCGC GCAAGCGGGC GCTGTTGCTG 
CACTTCGGCA CTGCGGGCAA GGTGCGCGCG GCGAGCCTCG AGGACCTTCA GCGCGCACCG 
GGCGTAAGTG CGGCGGTCGC GCAGACGATC TACGACTTCT ACCATCCCTC GGGATAG 

 

Protein sequence

MRRAPERLSA CHAMARKPQT PPDRETERFH EERAATTLRG ADRPDIELGA GVIRETVQTL 
KPKPGVYRML DARGDVLYVG KARALKNRVA NYTQVERLPN RLRRMVSQTR SMTIVTTNSE 
AEALLLEAQL IKRFRPPYNV LLRDDKSFPF ILLRGDHAFP RISKHRGARK AKGNYYGPFA 
SAGSVNTTIN ALQKLFLLRS CNDGFMARRD RPCLLYQIRR CSAPCVGRIS EADYGELVRQ 
AKDFLGGKSG AVQREIEAQM HKAAEDLDFE RAAMLRDRLR AATFIQGSQA INAEGVGNAD 
VFAMATKGGQ VAVQAFFIRG GQNWGHRAFF PSHTEGLSEE EVMTSFLAQF YEEVPPARLI 
LVDRALPEAD LLAEALCEAA GGKVEISVPQ RGDRRRLMEQ AQRNAVEALD RRMAESGTKA 
KVMRELAEFL ELPEVPQRIE IYDNSHIQGT NALGAMVVAG PEGFVKGQYR KWNIKLAQTN 
DDFAMMREVM TRRFGRAQEE DPDRESGNWP DLVLIDGGKG QMSAVKEALG ELGIEDVPLV 
AIAKGPHHGR EGREVFHFPD GREKMLPVNS PVLFQLQVMR DEVHRFAIGA HRAKRSRAIT 
ASPLDEIPGI GPARKRALLL HFGTAGKVRA ASLEDLQRAP GVSAAVAQTI YDFYHPSG