Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0753 |
Symbol | |
ID | 3918577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 799043 |
End bp | 800221 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640443485 |
Product | polysaccharide export protein |
Protein accession | YP_496034 |
Protein GI | 87198777 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATGT GCTCCGGCCT CTCCCGCTGG TCCGTTCTTT TGGCCGCTGG CTCCACCTTG CTAGCGGCAC TGTCCGGATG CAGCTCGCTC GGTTCTTCCG GCCCAAGCGC GCGGAAGATC AATTCCGTAG AGAATGCGCA GGAACACGGC ATTGCCGTCG TCACGCTCGA CGGCGCTCAG CTTTCCAGGC TCGACGCGCT TGCCGCCAGC CAGTCGTTTT TGGACGTTCT CGGCGATTTT CCTGCCGATC CCACGGTTAT CGGTCCGGGC GATTCCGTCG ATGTCTCGAT GTGGGAGGCA CCGCCGGCGG TTCTGTTCGG CACCGCCGTC CCGATGAGCC GCGACGGCGG CGGATCGCTG GTTCAGGGTG TGAACTTGCC GCAACAGATG GTCGCGGCGG ATGGCCGGAT CACCGTCCCG TTCGTCGGGC CTGTTGCAGT GGCCGGGCGC CAGACCCGCG ATGTCGAGCG GGAGATCGCC GCGCGCCTTC GCGCCAAGGC GCACGATCCG CAGGTTGTCG TGAGGCTTGC CCAGAACGAG ACGCGCAACG TCACCGTCAT GGGCGAGGTC GCGGCAAGCC GCCGCATCGC GCTCACTCCA CGGGGCGAAA GGCTGCTCGA TGCGCTCGCT TCGGCGGGTG GAAGCCGGCA ACCCGTGGGC AAGACCATGG TTCAGATCAC GCGCGGGACG ACCACCGCCA GCATGCCGCT CGACAAGGTC ATCCGCGATT CTCGCCAGAA CGTGCGGCTG CGCCCTGGCG ACGTCGTGAC GGCCCTGTAC CAGCCCTTCA GCTTTACTGC GCTGGGTGCA AGCAATCTCA ACGCCGAGAT TCCGTTCGAG GCTACCGGCA TCACGCTGGC CCAGGCGCTC GGCAGGGTAG GCGGGCTTCG GGATGACCGC GCGGACGTGC GCGGTGTTTT CATTTTTCGC TACGAAAGGC CCGAGGCGCT GGATGGCGCT GCAAGGGTCG GACCGTTAAC GCGAGAGGGA AGGGTGCCGG TCGTCTATCG CCTCGACATG AGCGAACCGG CAGGGCTGTT CCTCGCCCGC AACTTTTTCA TCGACGACAA GGATATCGTC TACGTCTCCA ACGCGCCCTT GGCCGACTTG CAGAAGTTCA TGAACATGGT TTCCTCGGCG ACGTTCTCCG TCATCGGCAT TACCAACGCC GTGCAGTGA
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Protein sequence | MTMCSGLSRW SVLLAAGSTL LAALSGCSSL GSSGPSARKI NSVENAQEHG IAVVTLDGAQ LSRLDALAAS QSFLDVLGDF PADPTVIGPG DSVDVSMWEA PPAVLFGTAV PMSRDGGGSL VQGVNLPQQM VAADGRITVP FVGPVAVAGR QTRDVEREIA ARLRAKAHDP QVVVRLAQNE TRNVTVMGEV AASRRIALTP RGERLLDALA SAGGSRQPVG KTMVQITRGT TTASMPLDKV IRDSRQNVRL RPGDVVTALY QPFSFTALGA SNLNAEIPFE ATGITLAQAL GRVGGLRDDR ADVRGVFIFR YERPEALDGA ARVGPLTREG RVPVVYRLDM SEPAGLFLAR NFFIDDKDIV YVSNAPLADL QKFMNMVSSA TFSVIGITNA VQ
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