Gene Saro_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0558 
Symbol 
ID3918688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp607023 
End bp607658 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content65% 
IMG OID640443288 
ProductTetR family transcriptional regulator 
Protein accessionYP_495839 
Protein GI87198582 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.235529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCAT CCGGCACCGA ACACGACGCC ATGCGGGCCC GGCTCGTCGA CGTGGCGCAG 
GCCATCGTCG AGGAGCGCGG CGGCGCCGGT CTCACCTTGT CCGAACTGGC GGCGCGGGCG 
GGCATCTCGC AGGCCAACCT CTCGCGCTAT TTCGAAACGC GCGAGGACCT GATGGAGGCG 
ATCGCCGACT ACTGGTTCCA CCCCATGGTC GAGATCATGG AGGACGTCCT TGCCAGCGAC 
CTGCCGCCAC GGCGCAAGAT GTACGAGTTC TTCGCCCGCC GTTTCGTGGT GATGCGGCGC 
AAGTGGGAGG CCGACCCGGT AAAGCTGCAG ACCTATATCG AGGTCGGCAA CGACTACTTC 
GAGCAGGTCC GCAGCTACAT CGACCTGGCC GACCACTACC TTGGCGAGAT CATCGGCGAA 
GCGATGAGCG ACGGGGCCTT CAGCGGCCTC GAAGTGGACG AGACGATCAG CCTGGTGAAC 
CAGATGTGCG CGCCCTACTG CGCGCTCAAC ACCATGACCA CGTTCATGGA ACGGTTGAGC 
GAAGACAAGC TGGCGCGGAT CGTCGATGCC GTGTTCGACG GGCTTTCCGC GCAGGATCGC 
GGGGCCAGGT CGCTCACCGG TCTGCGCGCA GCCTGA
 
Protein sequence
MASSGTEHDA MRARLVDVAQ AIVEERGGAG LTLSELAARA GISQANLSRY FETREDLMEA 
IADYWFHPMV EIMEDVLASD LPPRRKMYEF FARRFVVMRR KWEADPVKLQ TYIEVGNDYF 
EQVRSYIDLA DHYLGEIIGE AMSDGAFSGL EVDETISLVN QMCAPYCALN TMTTFMERLS 
EDKLARIVDA VFDGLSAQDR GARSLTGLRA A