Gene Saro_0442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0442 
Symbol 
ID3918310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp481428 
End bp482825 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content69% 
IMG OID640443171 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_495724 
Protein GI87198467 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.331623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGAGCCT TGCGCCTCTG GCCCCGTAGC CTGCAGGGAC AGGTCCTGCT GGCGATTGCC 
TTCGCCCTGC TGATCGCGCA GACGATCTCG GCGGTGCTGA TCTGGCGCGA ACAGAGCCAC
CGCCGCGAAT CCGGGATGGT CAGCTCCGCC GCGTTCCGGT TGCTCGGCCC GCCGCCCGAA
ATGCGGCGCA AGCATCACGG CGATGACGAC GAGCGTCCGC CGCCGCCACC CTTCCGCGTC
GACGTGACCG ACCGTTCCCC CCAGCGCCCC GGCGAGCGCC GCCTCCCGCG CGTCGAGCAC
GAGCTTGCAG AGGTCCTCAC CGCGCAGGGA TATGACGCGG CCCAGGTTGT CGTGTTCCAG
CGCGATCCGC TGCAAGACGA GCCGAGCCTT GAATTCATGC GCCGCCACCG GCGCGAACTC
GCGGCGGTCT CGAAGGAACC GATGCCTCGC CTGGTCATCG CCGCTGTTCG CCAGTCGAGC
GGGCAATGGG TTTCGACCCG CGTGTTCAGC GAAGGCGGCG AGATGCGCGT GCTTGCCCCA
CTCGTCGGGC AGACGATCGT GCTCTACTTC GTGCTGGTCG GCGTCATGGC GCTTATCCTG
CGCCGCATCA CCCGCCCGCT TAAGGCGCTG ACCCGCCGCG TCGGCGATTT CGCCAGCAAT
CGTACGCTCG ATGGACAGCT GGAACCCGAA GGGCCGGAGG ATATCCAGGG CCTGATCGAC
GCGCACAACG CGATGGAAGC CCGGATCGCG GCCATGCTCG ACGAGAAGGA CGTCATGCTC
GGCGCCATCG GGCACGACCT CAAGACCCCT CTCGCCGCCC TGCGCGTGCG CATAGAGGCA
GTCGACGACG ATACCGAGCG CGCGCGCATG GCAGCCACCA TCGAGGACAT CAACCGCTCG
CTCGACGACA TTCTCTCGCT CGCCCGCGTC GGTCGCCCTT CCGACCCGGT GGAGCCGACG
GAACTTTCCG CTCTCGTCGC CGACGTGATC GGCGAATTCG AGGACATGGG GGAACCGGTC
GAACTGGGCG ACACCGAACG CGTCGTCGTT CCCCTGCGCG CCACCTGGCT GCGCCGCGCG
CTGCGCAACC TCGTTTCCAA CGCCATGCGC TATGGCGAAA GGGCGCGCGT ATCGCTGGCC
CGTGACGGGC GCACCGCCGT TCTCCGGATC GAGGACGATG GCCCCGGCAT CCCCGAAGGC
GAGATCGCGC GCATGATGGA GCCGTTCACG CGGCTGGAGG CATCGCGCAA CAGCGGTACC
GGCGGCACGG GCCTCGGCCT CACGCTTGCC CGCGCCATTG CGGACCAGCA CGGTGGGACC
CTGATCCTGA CGAACCGCCA CGGCCCCGGC GGCGAAATCG TCGGCCTGAC CGCCACGGTG
CGCCTGCCGA CGGGTTAA
 
Protein sequence
MRALRLWPRS LQGQVLLAIA FALLIAQTIS AVLIWREQSH RRESGMVSSA AFRLLGPPPE 
MRRKHHGDDD ERPPPPPFRV DVTDRSPQRP GERRLPRVEH ELAEVLTAQG YDAAQVVVFQ
RDPLQDEPSL EFMRRHRREL AAVSKEPMPR LVIAAVRQSS GQWVSTRVFS EGGEMRVLAP
LVGQTIVLYF VLVGVMALIL RRITRPLKAL TRRVGDFASN RTLDGQLEPE GPEDIQGLID
AHNAMEARIA AMLDEKDVML GAIGHDLKTP LAALRVRIEA VDDDTERARM AATIEDINRS
LDDILSLARV GRPSDPVEPT ELSALVADVI GEFEDMGEPV ELGDTERVVV PLRATWLRRA
LRNLVSNAMR YGERARVSLA RDGRTAVLRI EDDGPGIPEG EIARMMEPFT RLEASRNSGT
GGTGLGLTLA RAIADQHGGT LILTNRHGPG GEIVGLTATV RLPTG