| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0314 |
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| Symbol | |
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| ID | 3915556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 338682 |
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| End bp | 339458 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640443043 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_495596 |
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| Protein GI | 87198339 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCGC CGCTCAAACC CCCGGGCCTC CGGCCGATCC TCGCGGCAGG CGCAGCTGTG
CTGTCGCTGG GTGCAGCCGT GATCGCGCCC GCCCCGGCCC ATGCCCAGTT CGGGTTCGGC
GGGATCGTCT ACGATCCCAC CAACTACGCC CAGAACGTGC TGACGGCGGC CCGCACGCTC
GAGCAGATCA ACAATCAGAT CCGTTCATTG CAAAACCAGG CGACGTCGCT GATCAACGAG
GCGCGCAATC TGCAAAGTCT GCCGCTAACC GTGCTCGAGC CGATCCAGCA GCAGATCCGG
CAGACCCAGC AACTGCTGAG CAAGGCCCAG GGAATTGCCT ATGACGTGCA GGCGATCGAG
CGCGAGTTCG CCCGCAACTA TTCGCCGGCC AGCCTGACCG GTTCGCAGCG CGACATGGTT
CGCGGCGCGG AGGACCGCTG GCGCACCAGC GTCGGGGCCT TCGAAGATGC GCTCAAGGTC
CAGGCCGGAG CCGTCCAGAA CATCGAAGGC TCCCGCACCG CCGTGCAGAG CCTGGTCACC
GCCAGCCAGT CGGCCACCGG CGCGCTTCAG GCGGCGCAAG CCGGAAACCA GCTGCTCGCG
CTGCAATCGC AGCAGCTGGC CGATCTCATC GCGACCATGG CGGCCATGAA CCGGGCCCAG
GCGCTCGATG CTGCCAATGA AGCTGCCGCC AAGGCCCAGG CCCGCGAGCA GCTGCGCCGC
TTCATGGCGC CGGGCCGCGG CTACGTGCCG GTGAGCACGA AGCTCTATCG GGACTGA
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| Protein sequence | MKSPLKPPGL RPILAAGAAV LSLGAAVIAP APAHAQFGFG GIVYDPTNYA QNVLTAARTL
EQINNQIRSL QNQATSLINE ARNLQSLPLT VLEPIQQQIR QTQQLLSKAQ GIAYDVQAIE
REFARNYSPA SLTGSQRDMV RGAEDRWRTS VGAFEDALKV QAGAVQNIEG SRTAVQSLVT
ASQSATGALQ AAQAGNQLLA LQSQQLADLI ATMAAMNRAQ ALDAANEAAA KAQAREQLRR
FMAPGRGYVP VSTKLYRD
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